Debian NEW package overview for xpore
xpore_1.0-1_amd64.changes (click to toggle)
Format:1.8
Date:Fri, 21 May 2021 23:27:59 +0530
Source:xpore
Binary:xpore xpore-doc
Architecture:source all
Version:1.0-1
Distribution:unstable
Urgency:medium
Maintainer:Steffen Moeller <moeller@debian.org>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
xpore      - Nanopore analysis of differential RNA modifications
xpore-doc  - documentation for the xpore Python package
Closes:988690
Changes:
xpore (1.0-1) unstable; urgency=medium

  [ Steffen Moeller, Nilesh Patra ]
  * Initial release (Closes:#988690)
Files:
81954436e7a9ad2374a7a907d5ae4ed9 1965 science optional xpore_1.0-1.dsc
f4290d50716dec18831b7d57989e6047 167392 science optional xpore_1.0.orig.tar.gz
cfb5e0041b71e287515ec437f4c6afb6 4524 science optional xpore_1.0-1.debian.tar.xz
2f2a720d292f92d9009e9f2c40d025d6 20924 doc optional xpore-doc_1.0-1_all.deb
d2904c61507b7a10c76d10feb1654f7c 28720 science optional xpore_1.0-1_all.deb
1873399fc0aa07424af5c3465b2565ab 7530 science optional xpore_1.0-1_amd64.buildinfo
xpore_1.0-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:xpore
Binary:xpore, xpore-doc
Architecture:all
Version:1.0-1
Maintainer:Steffen Moeller <moeller@debian.org>
Homepage:https://github.com/GoekeLab/xpore/
Standards-Version:4.5.1
Vcs-Browser:https://salsa.debian.org/med-team/xpore
Vcs-Git:https://salsa.debian.org/med-team/xpore.git
Build-Depends:debhelper-compat (=13), dh-python, python3-setuptools, python3-all, python3-sphinx<!nodoc>, python3-sphinx-rtd-theme<!nodoc>
Package-List:xpore deb science optional arch=all xpore-doc deb doc optional arch=all
Files:
f4290d50716dec18831b7d57989e6047 167392 xpore_1.0.orig.tar.gz
cfb5e0041b71e287515ec437f4c6afb6 4524 xpore_1.0-1.debian.tar.xz
lintian 2.94.0~bpo10+1 check for xpore_1.0-1.dsc (click to toggle)
README.source for xpore_1.0-1.dsc (click to toggle)
No README.source in this package
control file for xpore_1.0-1_all.deb (click to toggle)
Package:xpore
Version:1.0-1
Architecture:all
Maintainer:Steffen Moeller <moeller@debian.org>
Installed-Size:140
Depends:python3-h5py-serial, python3-numpy, python3-pandas, python3-scipy, python3-ujson, python3-yaml, python3:any, pyensembl
Suggests:xpore-doc
Section:science
Priority:optional
Homepage:https://github.com/GoekeLab/xpore/
Description:
Nanopore analysis of differential RNA modifications
 RNA is transcribed from DNA, possibly spliced and exported to the
 cytoplasm - fine - but its bases can also be modified, edited, and
 not all such modifications are visible by Sanger sequencing methods
 and its derivatives.
 .
 The Nanopore measures potentials, and if the bases have a different
 shape then this is measured - not necessarily in an interpretable manner,
 something must be left for mass spectrometry, but one may be pointed
 to a difference. And maybe one can even statistically associate such
 differences with a molecular or clinical phenotype.
lintian 2.94.0~bpo10+1 check for xpore_1.0-1_all.deb (click to toggle)
contents of xpore_1.0-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2021-05-21 17:57 ./
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/bin/
-rwxr-xr-x root/root       960 2021-05-21 17:57 ./usr/bin/xpore-dataprep
-rwxr-xr-x root/root       958 2021-05-21 17:57 ./usr/bin/xpore-diffmod
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/lib/
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/lib/python3/
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drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/lib/python3/dist-packages/xpore/diffmod/
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-rw-r--r-- root/root      2745 2021-03-07 12:27 ./usr/lib/python3/dist-packages/xpore/diffmod/configurator.py
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-rw-r--r-- root/root      8859 2021-03-07 12:27 ./usr/lib/python3/dist-packages/xpore/scripts/diffmod.py
-rw-r--r-- root/root      4820 2021-03-07 12:27 ./usr/lib/python3/dist-packages/xpore/scripts/helper.py
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/lib/python3/dist-packages/xpore/utils/
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-rw-r--r-- root/root      2966 2021-03-07 12:27 ./usr/lib/python3/dist-packages/xpore/utils/stats.py
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/lib/python3/dist-packages/xpore-1.0.egg-info/
-rw-r--r-- root/root      3092 2021-05-21 17:57 ./usr/lib/python3/dist-packages/xpore-1.0.egg-info/PKG-INFO
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-rw-r--r-- root/root       107 2021-05-21 17:57 ./usr/lib/python3/dist-packages/xpore-1.0.egg-info/entry_points.txt
-rw-r--r-- root/root        17 2021-05-21 17:57 ./usr/lib/python3/dist-packages/xpore-1.0.egg-info/requires.txt
-rw-r--r-- root/root         6 2021-05-21 17:57 ./usr/lib/python3/dist-packages/xpore-1.0.egg-info/top_level.txt
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/share/
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/share/doc/
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/share/doc/xpore/
-rw-r--r-- root/root       174 2021-05-21 17:57 ./usr/share/doc/xpore/changelog.Debian.gz
-rw-r--r-- root/root      1453 2021-05-21 17:19 ./usr/share/doc/xpore/copyright
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/share/man/
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/share/man/man1/
-rw-r--r-- root/root      1087 2021-05-21 17:57 ./usr/share/man/man1/xpore-dataprep.1.gz
-rw-r--r-- root/root       596 2021-05-21 17:57 ./usr/share/man/man1/xpore-diffmod.1.gz
control file for xpore-doc_1.0-1_all.deb (click to toggle)
Package:xpore-doc
Source:xpore
Version:1.0-1
Architecture:all
Maintainer:Steffen Moeller <moeller@debian.org>
Installed-Size:185
Depends:libjs-sphinxdoc (>=2.4.3-5~), sphinx-rtd-theme-common (>=0.5.1+dfsg)
Suggests:python-xpore-doc
Section:doc
Priority:optional
Homepage:https://github.com/GoekeLab/xpore/
Description:
documentation for the xpore Python package
 This package provides documentation for xpore
lintian 2.94.0~bpo10+1 check for xpore-doc_1.0-1_all.deb (click to toggle)
contents of xpore-doc_1.0-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2021-05-21 17:57 ./
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/share/
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/share/doc/
drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/share/doc/xpore-doc/
-rw-r--r-- root/root       174 2021-05-21 17:57 ./usr/share/doc/xpore-doc/changelog.Debian.gz
-rw-r--r-- root/root      1453 2021-05-21 17:19 ./usr/share/doc/xpore-doc/copyright
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drwxr-xr-x root/root         0 2021-05-21 17:57 ./usr/share/doc-base/
-rw-r--r-- root/root       309 2021-05-21 17:08 ./usr/share/doc-base/xpore
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lrwxrwxrwx root/root         0 2021-05-21 17:57 ./usr/share/doc/xpore-doc/html/_static/fonts/Lato-Regular.woff2 -> ../../../../../sphinx_rtd_theme/static/fonts/Lato-Regular.woff2
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Timestamp: 21.05.2021 / 19:00:59 (UTC)