Debian NEW package overview for twopaco
twopaco_0.9.4+dfsg-1_amd64.changes (click to toggle)
Format:1.8
Date:Sun, 20 Feb 2022 18:51:57 +0100
Source:twopaco
Binary:twopaco twopaco-dbgsym
Architecture:source amd64
Version:0.9.4+dfsg-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Andreas Tille <tille@debian.org>
Description:
twopaco    - build the compacted de Bruijn graph from many complete genomes
Closes:1006180
Changes:
twopaco (0.9.4+dfsg-1) unstable; urgency=medium

  * Initial release (Closes: #1006180)
Files:
e19854393ec35e382f76dc6d82e6d1eb 2022 science optional twopaco_0.9.4+dfsg-1.dsc
0fd49132b86fbd33b4ba1fb1fed8caa0 178848 science optional twopaco_0.9.4+dfsg.orig.tar.xz
7ba37a442f5f51923f32fc530081c183 5616 science optional twopaco_0.9.4+dfsg-1.debian.tar.xz
c89b288cb1c560dd6dc1e2350c8e137d 6140680 debug optional twopaco-dbgsym_0.9.4+dfsg-1_amd64.deb
fd5ff650d853238e796b9d96f044ada2 6934 science optional twopaco_0.9.4+dfsg-1_amd64.buildinfo
bd67a2e2ea448461459b22881dcf0b6e 417316 science optional twopaco_0.9.4+dfsg-1_amd64.deb
twopaco_0.9.4+dfsg-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:twopaco
Binary:twopaco
Architecture:any
Version:0.9.4+dfsg-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Andreas Tille <tille@debian.org>
Homepage:https://github.com/medvedevgroup/TwoPaCo
Standards-Version:4.6.0
Vcs-Browser:https://salsa.debian.org/med-team/twopaco
Vcs-Git:https://salsa.debian.org/med-team/twopaco.git
Testsuite:autopkgtest
Build-Depends:debhelper-compat (=13), cmake, libtbb-dev, libtclap-dev
Package-List:twopaco deb science optional arch=any
Files:
0fd49132b86fbd33b4ba1fb1fed8caa0 178848 twopaco_0.9.4+dfsg.orig.tar.xz
7ba37a442f5f51923f32fc530081c183 5616 twopaco_0.9.4+dfsg-1.debian.tar.xz
lintian 2.94.0~bpo10+1 check for twopaco_0.9.4+dfsg-1.dsc (click to toggle)
README.source for twopaco_0.9.4+dfsg-1.dsc (click to toggle)
No README.source in this package
control file for twopaco_0.9.4+dfsg-1_amd64.deb (click to toggle)
Package:twopaco
Version:0.9.4+dfsg-1
Architecture:amd64
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:1752
Depends:libc6 (>=2.29), libgcc-s1 (>=3.0), libstdc++6 (>=11), libtbb2 (>=2017~U7)
Section:science
Priority:optional
Homepage:https://github.com/medvedevgroup/TwoPaCo
Description:
build the compacted de Bruijn graph from many complete genomes
 TwoPaCo is an implementation of the algorithm described in the paper
 "TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph
 from many complete genomes".
 .
 This package contains two programs:
 .
  twopaco: tool for direct construction of the compressed graph from
           multiple complete genomes
  graphdump: utility that turns output of twopaco into a text format
lintian 2.94.0~bpo10+1 check for twopaco_0.9.4+dfsg-1_amd64.deb (click to toggle)
contents of twopaco_0.9.4+dfsg-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2022-02-20 17:51 ./
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/bin/
-rwxr-xr-x root/root    208184 2022-02-20 17:51 ./usr/bin/graphdump
-rwxr-xr-x root/root   1408752 2022-02-20 17:51 ./usr/bin/twopaco
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/share/
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/share/doc/
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/share/doc/twopaco/
-rw-r--r-- root/root       160 2022-02-20 17:51 ./usr/share/doc/twopaco/changelog.Debian.gz
-rw-r--r-- root/root      3922 2022-02-20 17:51 ./usr/share/doc/twopaco/copyright
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/share/doc/twopaco/examples/
-rw-r--r-- root/root      1239 2020-09-25 10:35 ./usr/share/doc/twopaco/examples/README.md
-rw-r--r-- root/root       204 2022-02-20 17:51 ./usr/share/doc/twopaco/examples/example.dbg
-rw-r--r-- root/root      1294 2022-02-20 17:51 ./usr/share/doc/twopaco/examples/example.dot
-rw-r--r-- root/root       929 2020-09-25 10:35 ./usr/share/doc/twopaco/examples/example.fa
-rw-r--r-- root/root     94943 2020-09-25 10:35 ./usr/share/doc/twopaco/examples/example.png
-rw-r--r-- root/root       129 2020-09-25 10:35 ./usr/share/doc/twopaco/examples/example.seq
-rw-r--r-- root/root     51089 2020-09-25 10:35 ./usr/share/doc/twopaco/examples/example_bandage.png
-rw-r--r-- root/root       588 2020-09-25 10:35 ./usr/share/doc/twopaco/examples/example_fasta.fa
-rw-r--r-- root/root      1115 2020-09-25 10:35 ./usr/share/doc/twopaco/examples/example_gfa1.gfa
-rw-r--r-- root/root      1374 2020-09-25 10:35 ./usr/share/doc/twopaco/examples/example_gfa2.gfa
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/share/man/
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/share/man/man1/
-rw-r--r-- root/root       703 2022-02-20 17:51 ./usr/share/man/man1/graphdump.1.gz
-rw-r--r-- root/root       847 2022-02-20 17:51 ./usr/share/man/man1/twopaco.1.gz
control file for twopaco-dbgsym_0.9.4+dfsg-1_amd64.deb (click to toggle)
Package:twopaco-dbgsym
Source:twopaco
Version:0.9.4+dfsg-1
Auto-Built-Package:debug-symbols
Architecture:amd64
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:6413
Depends:twopaco (=0.9.4+dfsg-1)
Section:debug
Priority:optional
Description:
debug symbols for twopaco
Build-Ids:1d2f2ac406101c2f5341d60c95102ace77eec3f4 3d303c511d767da4be368a0e78b0ee06f496ec21
lintian 2.94.0~bpo10+1 check for twopaco-dbgsym_0.9.4+dfsg-1_amd64.deb (click to toggle)
contents of twopaco-dbgsym_0.9.4+dfsg-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2022-02-20 17:51 ./
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/lib/
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/lib/debug/
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/lib/debug/.build-id/1d/
-rw-r--r-- root/root   5658056 2022-02-20 17:51 ./usr/lib/debug/.build-id/1d/2f2ac406101c2f5341d60c95102ace77eec3f4.debug
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/lib/debug/.build-id/3d/
-rw-r--r-- root/root    815032 2022-02-20 17:51 ./usr/lib/debug/.build-id/3d/303c511d767da4be368a0e78b0ee06f496ec21.debug
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/lib/debug/.dwz/x86_64-linux-gnu/
-rw-r--r-- root/root     78888 2022-02-20 17:51 ./usr/lib/debug/.dwz/x86_64-linux-gnu/twopaco.debug
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/share/
drwxr-xr-x root/root         0 2022-02-20 17:51 ./usr/share/doc/
lrwxrwxrwx root/root         0 2022-02-20 17:51 ./usr/share/doc/twopaco-dbgsym -> twopaco

Timestamp: 20.02.2022 / 19:01:09 (UTC)