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samblaster_0.1.24-1_amd64.changes (click to toggle)
Format:1.8
Date:Tue, 10 Jul 2018 22:52:21 +0200
Source:samblaster
Binary:samblaster
Architecture:source amd64
Version:0.1.24-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
samblaster - marks duplicates, extracts discordant/split reads
Closes:903515
Changes:
samblaster (0.1.24-1) unstable; urgency=medium

  * Initial release (Closes: #903515)
Files:
b1e81ace58939cd4450411584316e3c8 1967 science optional samblaster_0.1.24-1.dsc
885d5782cc277865dfb086fc0a20243e 130294 science optional samblaster_0.1.24.orig.tar.gz
9358e4a56c65c3cfa843d21ab832d3d8 4060 science optional samblaster_0.1.24-1.debian.tar.xz
37590aabdd3a0fb690bb1dc48d2b554f 63016 debug optional samblaster-dbgsym_0.1.24-1_amd64.deb
0cf9c35311c5c58ff2121d7f6e277c09 5867 science optional samblaster_0.1.24-1_amd64.buildinfo
2ad9968272758f657efa03dca3593f48 23466 science optional samblaster_0.1.24-1_amd64.deb
samblaster_0.1.24-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:samblaster
Binary:samblaster
Architecture:any
Version:0.1.24-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Steffen Moeller <moeller@debian.org>
Homepage:https://github.com/GregoryFaust/samblaster
Standards-Version:4.1.5
Vcs-Browser:https://salsa.debian.org/med-team/samblaster
Vcs-Git:https://salsa.debian.org/med-team/samblaster.git
Build-Depends:debhelper (>=11)
Package-List:samblaster deb science optional arch=any
Files:
885d5782cc277865dfb086fc0a20243e 130294 samblaster_0.1.24.orig.tar.gz
9358e4a56c65c3cfa843d21ab832d3d8 4060 samblaster_0.1.24-1.debian.tar.xz
lintian check for samblaster_0.1.24-1.dsc (click to toggle)
W: samblaster source: newer-standards-version 4.1.5 (current is 4.1.4)
README.source for samblaster_0.1.24-1.dsc (click to toggle)
No README.source in this package
control file for samblaster-dbgsym_0.1.24-1_amd64.deb (click to toggle)
Package:samblaster-dbgsym
Source:samblaster
Version:0.1.24-1
Architecture:amd64
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:78
Depends:samblaster (=0.1.24-1)
Section:debug
Priority:optional
Description:
debug symbols for samblaster
Auto-Built-Package:debug-symbols
Build-Ids:652484888fb9bc0b91110f8bc0ae7a501300612f
lintian check for samblaster-dbgsym_0.1.24-1_amd64.deb (click to toggle)
contents of samblaster-dbgsym_0.1.24-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2018-07-10 20:52 ./
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/lib/
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/lib/debug/
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/lib/debug/.build-id/65/
-rw-r--r-- root/root     69576 2018-07-10 20:52 ./usr/lib/debug/.build-id/65/2484888fb9bc0b91110f8bc0ae7a501300612f.debug
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/share/
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/share/doc/
lrwxrwxrwx root/root         0 2018-07-10 20:52 ./usr/share/doc/samblaster-dbgsym -> samblaster
control file for samblaster_0.1.24-1_amd64.deb (click to toggle)
Package:samblaster
Version:0.1.24-1
Architecture:amd64
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:61
Depends:libc6 (>=2.14), libstdc++6 (>=5)
Section:science
Priority:optional
Homepage:https://github.com/GregoryFaust/samblaster
Description:
marks duplicates, extracts discordant/split reads
 Current "next-generation" sequencing technologies cannot tell what
 exact sequence they will be reading. They take what is available. And
 if some sequences are read very often, then this needs some extra
 biomedical thinking. The genome could for instance be duplicated.
 .
 samblaster is a fast and flexible program for marking duplicates in
 read-id grouped paired-end SAM files. It can also optionally output
 discordant read pairs and/or split read mappings to separate SAM files,
 and/or unmapped/clipped reads to a separate FASTQ file. When marking
 duplicates, samblaster will require approximately 20MB of memory per
 1M read pairs.
lintian check for samblaster_0.1.24-1_amd64.deb (click to toggle)
contents of samblaster_0.1.24-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2018-07-10 20:52 ./
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/bin/
-rwxr-xr-x root/root     43008 2018-07-10 20:52 ./usr/bin/samblaster
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/share/
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/share/doc/
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/share/doc/samblaster/
-rw-r--r-- root/root      4249 2016-11-28 21:55 ./usr/share/doc/samblaster/README.md.gz
-rw-r--r-- root/root       161 2018-07-10 20:52 ./usr/share/doc/samblaster/changelog.Debian.gz
-rw-r--r-- root/root      1375 2018-07-10 20:52 ./usr/share/doc/samblaster/copyright
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/share/man/
drwxr-xr-x root/root         0 2018-07-10 20:52 ./usr/share/man/man1/
-rw-r--r-- root/root      1386 2018-07-10 20:52 ./usr/share/man/man1/samblaster.1.gz

Timestamp: 11.07.2018 / 08:11:08 (UTC)