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r-other-wgcna_1.67-2_amd64.changes (click to toggle)
Format:1.8
Date:Tue, 24 Sep 2019 16:42:59 +0200
Source:r-other-wgcna
Binary:r-other-wgcna r-other-wgcna-dbgsym
Architecture:source amd64
Version:1.67-2
Distribution:unstable
Urgency:medium
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
r-other-wgcna - Weighted Correlation Network Analysis
Closes:939972
Changes:
r-other-wgcna (1.67-2) unstable; urgency=medium

  * Added missing build-dep to dynamicTreeCut and other packages
  * Further contributed to d/u/metadata
  * Further work on description of auxillary data/*.rda files in d/README.source

  * Now really (closes: #939972)
Files:
919631d3e1ee0f4f0ca650fc22dcd0e9 2343 gnu-r optional r-other-wgcna_1.67-2.dsc
6cab6260346ed1d36288f3f72358678f 1163525 gnu-r optional r-other-wgcna_1.67.orig.tar.gz
a16c905a340b901180907bcce09746f2 2964 gnu-r optional r-other-wgcna_1.67-2.debian.tar.xz
e51daac01c16a4a4e9d1613e7a665e09 492904 debug optional r-other-wgcna-dbgsym_1.67-2_amd64.deb
78411e82dad2c7937c199a7aa33f5141 12793 gnu-r optional r-other-wgcna_1.67-2_amd64.buildinfo
a22bd28b60e93530d1a3bd60ddb039f5 2942116 gnu-r optional r-other-wgcna_1.67-2_amd64.deb
r-other-wgcna_1.67-2.dsc (click to toggle)
Format:3.0 (quilt)
Source:r-other-wgcna
Binary:r-other-wgcna
Architecture:any
Version:1.67-2
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders:Steffen Moeller <moeller@debian.org>
Homepage:https://cran.r-project.org/package=WGCNA
Standards-Version:4.4.0
Vcs-Browser:https://salsa.debian.org/r-pkg-team/r-cran-wgcna
Vcs-Git:https://salsa.debian.org/r-pkg-team/r-cran-wgcna.git
Testsuite:autopkgtest-pkg-r
Build-Depends:debhelper-compat (=12), dh-r, r-base-dev, r-cran-fastcluster, r-cran-matrixstats (>=0.8.1), r-cran-hmisc, r-bioc-impute, r-cran-foreach, r-cran-doparallel, r-bioc-preprocesscore, r-cran-survival, r-bioc-go.db, r-bioc-annotationdbi, r-cran-rcpp (>=0.11.0), r-cran-robust, r-cran-dynamictreecut, r-cran-fit.models, r-cran-rrcov, r-cran-pcapp
Package-List:r-other-wgcna deb gnu-r optional arch=any
Files:
6cab6260346ed1d36288f3f72358678f 1163525 r-other-wgcna_1.67.orig.tar.gz
a16c905a340b901180907bcce09746f2 2964 r-other-wgcna_1.67-2.debian.tar.xz
lintian 2.21.0~bpo9+1 check for r-other-wgcna_1.67-2.dsc (click to toggle)
README.source for r-other-wgcna_1.67-2.dsc (click to toggle)
data/BloodLists.rda	Adopted from scientific paper
data/BrainLists.rda	Adopted from scientific paper
data/BrainRegionMarkers.rda	Adopted from scientific paper
data/ImmunePathwayLists.rda	Gene-to-pathway assignment for immnological investigation
data/PWLists.rda	Pathways from the Reactome pathway database
data/SCsLists.rda	Adopted from scientific paper Polycomb proteins in human embryonic SCs, with info provided in Lee TI, Jenner RG, Boyer LA, Guenther MG, Levine SS, Kumar RM, Chevalier B, Johnstone SE, Cole MF, Isono K, et -al. (2006) Control of developmental regulators by polycomb in human embryonic stem cells. Cell 125:301-313

See man/userListEnrichment.Rd for exact references.
control file for r-other-wgcna_1.67-2_amd64.deb (click to toggle)
Package:r-other-wgcna
Version:1.67-2
Architecture:amd64
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size:3135
Depends:r-base-core (>=3.6.1-5), r-api-3.5, r-cran-dynamictreecut (>=1.62), r-cran-fastcluster, r-cran-matrixstats (>=0.8.1), r-cran-hmisc, r-bioc-impute, r-cran-foreach, r-cran-doparallel, r-bioc-preprocesscore, r-cran-survival, r-bioc-go.db, r-bioc-annotationdbi, r-cran-rcpp (>=0.11.0), r-cran-robust, libc6 (>=2.29), libgcc1 (>=1:3.0), libstdc++6 (>=5.2)
Provides:r-bioc-wgcna
Section:gnu-r
Priority:optional
Homepage:https://cran.r-project.org/package=WGCNA
Description:
Weighted Correlation Network Analysis
 Functions necessary to perform Weighted Correlation Network Analysis
 on high-dimensional data as originally described in Horvath and Zhang
 (2005) <doi:10.2202/1544-6115.1128> and Langfelder and Horvath (2008)
 <doi:10.1186/1471-2105-9-559>. Includes functions for rudimentary data
 cleaning, construction of correlation networks, module identification,
 summarization, and relating of variables and modules to sample
 traits. Also includes a number of utility functions for data manipulation
 and visualization.
lintian 2.21.0~bpo9+1 check for r-other-wgcna_1.67-2_amd64.deb (click to toggle)
W: r-other-wgcna: spelling-error-in-changelog auxillary auxiliary
contents of r-other-wgcna_1.67-2_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2019-09-24 14:42 ./
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/R/
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/R/site-library/
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/
-rw-r--r-- root/root      1535 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/CITATION
-rw-r--r-- root/root      1528 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/DESCRIPTION
-rw-r--r-- root/root     21437 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/INDEX
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/Meta/
-rw-r--r-- root/root      9436 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/Meta/Rd.rds
-rw-r--r-- root/root       285 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/Meta/data.rds
-rw-r--r-- root/root       132 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/Meta/features.rds
-rw-r--r-- root/root      8871 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/Meta/hsearch.rds
-rw-r--r-- root/root      4056 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/Meta/links.rds
-rw-r--r-- root/root       924 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/Meta/nsInfo.rds
-rw-r--r-- root/root      1514 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/Meta/package.rds
-rw-r--r-- root/root      1594 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/NAMESPACE
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/R/
-rw-r--r-- root/root      1056 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/R/WGCNA
-rw-r--r-- root/root   1215862 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/R/WGCNA.rdb
-rw-r--r-- root/root      6660 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/R/WGCNA.rdx
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/data/
-rw-r--r-- root/root      8061 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/data/BloodLists.rda
-rw-r--r-- root/root    118257 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/data/BrainLists.rda
-rw-r--r-- root/root     76877 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/data/BrainRegionMarkers.rda
-rw-r--r-- root/root      8500 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/data/ImmunePathwayLists.rda
-rw-r--r-- root/root    383560 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/data/PWLists.rda
-rw-r--r-- root/root     33424 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/data/SCsLists.rda
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/help/
-rw-r--r-- root/root     10184 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/help/AnIndex
-rw-r--r-- root/root    989547 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/help/WGCNA.rdb
-rw-r--r-- root/root      5680 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/help/WGCNA.rdx
-rw-r--r-- root/root      2793 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/help/aliases.rds
-rw-r--r-- root/root      2578 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/help/paths.rds
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/html/
-rw-r--r-- root/root     45862 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/html/00Index.html
-rw-r--r-- root/root      1335 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/html/R.css
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/libs/
-rw-r--r-- root/root    192280 2019-09-24 14:42 ./usr/lib/R/site-library/WGCNA/libs/WGCNA.so
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/share/
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/share/doc/r-other-wgcna/
-rw-r--r-- root/root       315 2019-09-24 14:42 ./usr/share/doc/r-other-wgcna/changelog.Debian.gz
-rw-r--r-- root/root     22539 2019-09-06 09:07 ./usr/share/doc/r-other-wgcna/changelog.gz
-rw-r--r-- root/root      1553 2019-09-24 14:42 ./usr/share/doc/r-other-wgcna/copyright
control file for r-other-wgcna-dbgsym_1.67-2_amd64.deb (click to toggle)
Package:r-other-wgcna-dbgsym
Source:r-other-wgcna
Version:1.67-2
Auto-Built-Package:debug-symbols
Architecture:amd64
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size:520
Depends:r-other-wgcna (=1.67-2)
Section:debug
Priority:optional
Description:
debug symbols for r-other-wgcna
Build-Ids:2d8597c4f4475282aa158d692873a026e428cf2c
lintian 2.21.0~bpo9+1 check for r-other-wgcna-dbgsym_1.67-2_amd64.deb (click to toggle)
contents of r-other-wgcna-dbgsym_1.67-2_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2019-09-24 14:42 ./
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/debug/
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/lib/debug/.build-id/2d/
-rw-r--r-- root/root    521872 2019-09-24 14:42 ./usr/lib/debug/.build-id/2d/8597c4f4475282aa158d692873a026e428cf2c.debug
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/share/
drwxr-xr-x root/root         0 2019-09-24 14:42 ./usr/share/doc/
lrwxrwxrwx root/root         0 2019-09-24 14:42 ./usr/share/doc/r-other-wgcna-dbgsym -> r-other-wgcna

Timestamp: 25.09.2019 / 15:11:44 (UTC)