Debian NEW package overview for r-other-kcha-psiplot
r-other-kcha-psiplot_2.3.0-1_amd64.changes (click to toggle)
Format:1.8
Date:Sat, 02 Oct 2021 15:52:51 +0200
Source:r-other-kcha-psiplot
Binary:r-other-kcha-psiplot
Architecture:source amd64
Version:2.3.0-1
Distribution:unstable
Urgency:medium
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
r-other-kcha-psiplot - plots relative abundance alterantively spliced transcripts
Closes:995834
Changes:
r-other-kcha-psiplot (2.3.0-1) unstable; urgency=medium

  * Initial release (closes: #995834)
Files:
b623a4f6f4275a599173441575301885 2179 gnu-r optional r-other-kcha-psiplot_2.3.0-1.dsc
70d5df4d43d7ec2858e429bb73018808 527748 gnu-r optional r-other-kcha-psiplot_2.3.0.orig.tar.gz
bd1a089ecd92d18d6743ff3d5cdffa2f 2492 gnu-r optional r-other-kcha-psiplot_2.3.0-1.debian.tar.xz
1a44536af5592f8a928e20d631877bc6 12595 gnu-r optional r-other-kcha-psiplot_2.3.0-1_amd64.buildinfo
bfb73ff92d4fd8981a2c1a583f07866b 221520 gnu-r optional r-other-kcha-psiplot_2.3.0-1_amd64.deb
r-other-kcha-psiplot_2.3.0-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:r-other-kcha-psiplot
Binary:r-other-kcha-psiplot
Architecture:any
Version:2.3.0-1
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders:Steffen Moeller <moeller@debian.org>
Homepage:https://github.com/kcha/psiplot
Standards-Version:4.6.0
Vcs-Browser:https://salsa.debian.org/r-pkg-team/r-other-psiplot
Vcs-Git:https://salsa.debian.org/r-pkg-team/r-other-psiplot.git
Testsuite:autopkgtest-pkg-r
Build-Depends:debhelper-compat (=13), dh-r, r-base-dev, r-cran-mass, r-cran-dplyr, r-cran-tidyr, r-cran-purrr, r-cran-readr, r-cran-magrittr, r-cran-ggplot2
Package-List:r-other-kcha-psiplot deb gnu-r optional arch=any
Files:
70d5df4d43d7ec2858e429bb73018808 527748 r-other-kcha-psiplot_2.3.0.orig.tar.gz
bd1a089ecd92d18d6743ff3d5cdffa2f 2492 r-other-kcha-psiplot_2.3.0-1.debian.tar.xz
lintian 2.94.0~bpo10+1 check for r-other-kcha-psiplot_2.3.0-1.dsc (click to toggle)
README.source for r-other-kcha-psiplot_2.3.0-1.dsc (click to toggle)
The files

./data/config.rda
./data/crpkm.rda
./data/crpkm_counts.rda
./data/psi.rda

represent a very small experimental setup featuring 6 genes, each assigned
a float values for 8 samples.
control file for r-other-kcha-psiplot_2.3.0-1_amd64.deb (click to toggle)
Package:r-other-kcha-psiplot
Version:2.3.0-1
Architecture:amd64
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size:268
Depends:r-base-core (>=4.1.1-2), r-api-4.0, r-cran-mass, r-cran-dplyr, r-cran-tidyr, r-cran-purrr, r-cran-readr, r-cran-magrittr, r-cran-ggplot2
Suggests:r-cran-testthat, r-cran-pheatmap, r-cran-gplots, r-cran-ggbeeswarm (>= 0.6.0), r-cran-knitr, r-cran-rmarkdown, vast-tools
Section:gnu-r
Priority:optional
Homepage:https://github.com/kcha/psiplot
Description:
plots relative abundance alterantively spliced transcripts
 Provides functions to create plots of PSI values of alternatively-spliced
 exons or cRPKMs. Requires PSI cRPKM data generated by the program
 vast-tools (https://github.com/vastgroup/vast-tools).
lintian 2.94.0~bpo10+1 check for r-other-kcha-psiplot_2.3.0-1_amd64.deb (click to toggle)
contents of r-other-kcha-psiplot_2.3.0-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2021-10-02 13:52 ./
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/lib/
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/lib/R/
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/lib/R/site-library/
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/
-rw-r--r-- root/root      1560 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/CITATION
-rw-r--r-- root/root      1044 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/DESCRIPTION
-rw-r--r-- root/root      1526 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/INDEX
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/Meta/
-rw-r--r-- root/root      1025 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/Meta/Rd.rds
-rw-r--r-- root/root       209 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/Meta/data.rds
-rw-r--r-- root/root       123 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/Meta/features.rds
-rw-r--r-- root/root       950 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/Meta/hsearch.rds
-rw-r--r-- root/root       390 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/Meta/links.rds
-rw-r--r-- root/root       364 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/Meta/nsInfo.rds
-rw-r--r-- root/root      1132 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/Meta/package.rds
-rw-r--r-- root/root       433 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/NAMESPACE
-rw-r--r-- root/root      4133 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/NEWS.md
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/R/
-rw-r--r-- root/root      1058 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/R/psiplot
-rw-r--r-- root/root     60519 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/R/psiplot.rdb
-rw-r--r-- root/root       525 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/R/psiplot.rdx
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/data/
-rw-r--r-- root/root      6607 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/data/Rdata.rdb
-rw-r--r-- root/root       114 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/data/Rdata.rds
-rw-r--r-- root/root       190 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/data/Rdata.rdx
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/help/
-rw-r--r-- root/root       508 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/help/AnIndex
-rw-r--r-- root/root       273 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/help/aliases.rds
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/help/figures/
-rw-r--r-- root/root     43103 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/help/figures/plot_event-1.png
-rw-r--r-- root/root     49475 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/help/figures/plot_multievent-1.png
-rw-r--r-- root/root       315 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/help/paths.rds
-rw-r--r-- root/root     55041 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/help/psiplot.rdb
-rw-r--r-- root/root       619 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/help/psiplot.rdx
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/html/
-rw-r--r-- root/root      3904 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/html/00Index.html
-rw-r--r-- root/root      1335 2021-10-02 13:52 ./usr/lib/R/site-library/psiplot/html/R.css
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/share/
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/share/doc/
drwxr-xr-x root/root         0 2021-10-02 13:52 ./usr/share/doc/r-other-kcha-psiplot/
-rw-r--r-- root/root       166 2021-10-02 13:52 ./usr/share/doc/r-other-kcha-psiplot/changelog.Debian.gz
-rw-r--r-- root/root      1333 2021-10-02 13:52 ./usr/share/doc/r-other-kcha-psiplot/copyright

Timestamp: 07.10.2021 / 20:11:00 (UTC)