Debian NEW package overview for r-cran-dendsort
r-cran-dendsort_0.3.4+dfsg-1_amd64.changes (click to toggle)
Format:1.8
Date:Mon, 15 Aug 2022 11:39:30 +0200
Source:r-cran-dendsort
Binary:r-cran-dendsort
Architecture:source all
Version:0.3.4+dfsg-1
Distribution:unstable
Urgency:medium
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By:Andreas Tille <tille@debian.org>
Description:
r-cran-dendsort - GNU R Modular Leaf Ordering Methods for Dendrogram Nodes
Closes:1017376
Changes:
r-cran-dendsort (0.3.4+dfsg-1) unstable; urgency=medium

  * Initial release (closes: #1017376)
Files:
642a9e3070e3dfac8ca388190cf3245d 2100 gnu-r optional r-cran-dendsort_0.3.4+dfsg-1.dsc
dc2caf0e9c36b4901d686e85c82d6064 807676 gnu-r optional r-cran-dendsort_0.3.4+dfsg.orig.tar.xz
2b5b48f827319296fc6038744b9e225b 2288 gnu-r optional r-cran-dendsort_0.3.4+dfsg-1.debian.tar.xz
8742a012e1144cdf45818906eeedd37e 82292 gnu-r optional r-cran-dendsort_0.3.4+dfsg-1_all.deb
c1b3397a8348f15b6d5f0f9dc5ca1aa5 10644 gnu-r optional r-cran-dendsort_0.3.4+dfsg-1_amd64.buildinfo
r-cran-dendsort_0.3.4+dfsg-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:r-cran-dendsort
Binary:r-cran-dendsort
Architecture:all
Version:0.3.4+dfsg-1
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders:Andreas Tille <tille@debian.org>
Homepage:https://cran.r-project.org/package=dendsort
Standards-Version:4.6.1
Vcs-Browser:https://salsa.debian.org/r-pkg-team/r-cran-dendsort
Vcs-Git:https://salsa.debian.org/r-pkg-team/r-cran-dendsort.git
Testsuite:autopkgtest-pkg-r
Build-Depends:debhelper-compat (=13), dh-r, r-base-dev
Package-List:r-cran-dendsort deb gnu-r optional arch=all
Files:
dc2caf0e9c36b4901d686e85c82d6064 807676 r-cran-dendsort_0.3.4+dfsg.orig.tar.xz
2b5b48f827319296fc6038744b9e225b 2288 r-cran-dendsort_0.3.4+dfsg-1.debian.tar.xz
lintian 2.104.0 check for r-cran-dendsort_0.3.4+dfsg-1.dsc (click to toggle)
README.source for r-cran-dendsort_0.3.4+dfsg-1.dsc (click to toggle)
Explanation for binary files inside source package according to
  https://lists.debian.org/debian-devel/2013/09/msg00332.html

Files: data/sample_tcga.rda
Documented: man/sample_tcga.Rd
  Sample data matrix from the integrated pathway analysis of gastric cancer from the Cancer Genome Atlas (TCGA) study

 -- Andreas Tille <tille@debian.org>  Mon, 15 Aug 2022 07:46:17 +0200
control file for r-cran-dendsort_0.3.4+dfsg-1_all.deb (click to toggle)
Package:r-cran-dendsort
Version:0.3.4+dfsg-1
Architecture:all
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size:137
Depends:r-base-core (>=4.2.1-2), r-api-4.0
Suggests:r-cran-knitr, r-cran-rcolorbrewer, r-cran-gplots, r-cran-seriation, r-cran-rmarkdown
Section:gnu-r
Priority:optional
Homepage:https://cran.r-project.org/package=dendsort
Description:
GNU R Modular Leaf Ordering Methods for Dendrogram Nodes
 An implementation of functions to optimize ordering of nodes in a
 dendrogram, without affecting the meaning of the dendrogram. A
 dendrogram can be sorted based on the average distance of subtrees, or
 based on the smallest distance value. These sorting methods improve
 readability and interpretability of tree structure, especially for tasks
 such as comparison of different distance measures or linkage types and
 identification of tight clusters and outliers. As a result, it also
 introduces more meaningful reordering for a coupled heatmap
 visualization. This method is described in "dendsort: modular leaf
 ordering methods for dendrogram representations in R", F1000Research
 2014, 3: 177 <doi:10.12688/f1000research.4784.1>.
lintian 2.104.0 check for r-cran-dendsort_0.3.4+dfsg-1_all.deb (click to toggle)
contents of r-cran-dendsort_0.3.4+dfsg-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2022-08-15 09:39 ./
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/lib/
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/lib/R/
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/lib/R/site-library/
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/
-rw-r--r-- root/root      1555 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/DESCRIPTION
-rw-r--r-- root/root       351 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/INDEX
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/Meta/
-rw-r--r-- root/root       696 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/Meta/Rd.rds
-rw-r--r-- root/root       190 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/Meta/data.rds
-rw-r--r-- root/root       131 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/Meta/features.rds
-rw-r--r-- root/root       669 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/Meta/hsearch.rds
-rw-r--r-- root/root       260 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/Meta/links.rds
-rw-r--r-- root/root       310 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/Meta/nsInfo.rds
-rw-r--r-- root/root      1275 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/Meta/package.rds
-rw-r--r-- root/root       223 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/Meta/vignette.rds
-rw-r--r-- root/root       306 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/NAMESPACE
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/R/
-rw-r--r-- root/root      1058 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/R/dendsort
-rw-r--r-- root/root     16250 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/R/dendsort.rdb
-rw-r--r-- root/root       403 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/R/dendsort.rdx
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/data/
-rw-r--r-- root/root     33830 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/data/sample_tcga.rda
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/doc/
-rw-r--r-- root/root      7439 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/doc/example_figures.R
-rw-r--r-- root/root      9823 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/doc/example_figures.Rmd
-rw-r--r-- root/root      1438 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/doc/index.html
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/help/
-rw-r--r-- root/root       278 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/help/AnIndex
-rw-r--r-- root/root       185 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/help/aliases.rds
-rw-r--r-- root/root     18678 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/help/dendsort.rdb
-rw-r--r-- root/root       395 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/help/dendsort.rdx
-rw-r--r-- root/root       229 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/help/paths.rds
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/html/
-rw-r--r-- root/root      1552 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/html/00Index.html
-rw-r--r-- root/root      1735 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/html/R.css
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/tests/
-rw-r--r-- root/root       413 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/tests/test-dendsort.R
-rw-r--r-- root/root       393 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/tests/test-sort_average.R
-rw-r--r-- root/root       395 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/tests/test-sort_average_r.R
-rw-r--r-- root/root       394 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/tests/test-sort_smallest.R
-rw-r--r-- root/root       396 2022-08-15 09:39 ./usr/lib/R/site-library/dendsort/tests/test-sort_smallest_r.R
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/share/
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/share/doc/
drwxr-xr-x root/root         0 2022-08-15 09:39 ./usr/share/doc/r-cran-dendsort/
-rw-r--r-- root/root       163 2022-08-15 09:39 ./usr/share/doc/r-cran-dendsort/changelog.Debian.gz
-rw-r--r-- root/root       992 2022-08-15 09:39 ./usr/share/doc/r-cran-dendsort/copyright

Timestamp: 15.08.2022 / 12:01:32 (UTC)