Debian NEW package overview for r-bioc-drimseq
r-bioc-drimseq_1.22.0-1_amd64.changes (click to toggle)
Format:1.8
Date:Thu, 18 Nov 2021 21:20:39 +0100
Source:r-bioc-drimseq
Binary:r-bioc-drimseq
Architecture:source all
Version:1.22.0-1
Distribution:unstable
Urgency:medium
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
r-bioc-drimseq - Differential transcript usage and tuQTL analyses with
Changes:
r-bioc-drimseq (1.22.0-1) unstable; urgency=medium

  [routine-update]
  * New upstream version
  * Trim trailing whitespace.
Files:
726aaa67909f2656652eeaaa6fc4b6f0 2260 gnu-r optional r-bioc-drimseq_1.22.0-1.dsc
7509e71d266e9803e28805eab35b5577 486946 gnu-r optional r-bioc-drimseq_1.22.0.orig.tar.gz
22aedb059ecffcace75f7ef6a630fd61 2512 gnu-r optional r-bioc-drimseq_1.22.0-1.debian.tar.xz
fb746ea7388005a7f296cfd057267b25 758840 gnu-r optional r-bioc-drimseq_1.22.0-1_all.deb
36d192573cd7eeb040cc71d7bc84a986 13051 gnu-r optional r-bioc-drimseq_1.22.0-1_amd64.buildinfo
r-bioc-drimseq_1.22.0-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:r-bioc-drimseq
Binary:r-bioc-drimseq
Architecture:all
Version:1.22.0-1
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders:Steffen Moeller <moeller@debian.org>
Homepage:https://bioconductor.org/packages/DRIMSeq/
Standards-Version:4.6.0
Vcs-Browser:https://salsa.debian.org/r-pkg-team/r-bioc-drimseq
Vcs-Git:https://salsa.debian.org/r-pkg-team/r-bioc-drimseq.git
Testsuite:autopkgtest, autopkgtest-pkg-r
Testsuite-Triggers:r-cran-testthat
Build-Depends:debhelper-compat (=13), dh-r, r-base-dev, r-cran-mass, r-bioc-genomicranges, r-bioc-iranges, r-bioc-s4vectors, r-bioc-biocgenerics, r-bioc-biocparallel, r-bioc-limma, r-bioc-edger, r-cran-ggplot2, r-cran-reshape2
Package-List:r-bioc-drimseq deb gnu-r optional arch=all
Files:
7509e71d266e9803e28805eab35b5577 486946 r-bioc-drimseq_1.22.0.orig.tar.gz
22aedb059ecffcace75f7ef6a630fd61 2512 r-bioc-drimseq_1.22.0-1.debian.tar.xz
lintian 2.94.0~bpo10+1 check for r-bioc-drimseq_1.22.0-1.dsc (click to toggle)
README.source for r-bioc-drimseq_1.22.0-1.dsc (click to toggle)
No README.source in this package
control file for r-bioc-drimseq_1.22.0-1_all.deb (click to toggle)
Package:r-bioc-drimseq
Version:1.22.0-1
Architecture:all
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size:1006
Depends:r-base-core (>=4.1.2-1), r-api-4.0, r-api-bioc-3.14, r-cran-mass, r-bioc-genomicranges, r-bioc-iranges, r-bioc-s4vectors, r-bioc-biocgenerics, r-bioc-biocparallel, r-bioc-limma, r-bioc-edger, r-cran-ggplot2, r-cran-reshape2
Recommends:r-cran-testthat
Suggests:r-bioc-biocstyle, r-cran-knitr
Section:gnu-r
Priority:optional
Homepage:https://bioconductor.org/packages/DRIMSeq/
Description:
Differential transcript usage and tuQTL analyses with
 Dirichlet-multinomial model in RNA-seq The package provides two
 frameworks. One for the differential transcript usage analysis
 between different conditions and one for the tuQTL analysis. Both
 are based on modeling the counts of genomic features (i.e.,
 transcripts) with the Dirichlet-multinomial distribution. The
 package also makes available functions for visualization and
 exploration of the data and results.
lintian 2.94.0~bpo10+1 check for r-bioc-drimseq_1.22.0-1_all.deb (click to toggle)
contents of r-bioc-drimseq_1.22.0-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2021-11-18 20:20 ./
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/lib/
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/lib/R/
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/lib/R/site-library/
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/
-rw-r--r-- root/root       859 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/CITATION
-rw-r--r-- root/root      2722 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/DESCRIPTION
-rw-r--r-- root/root      1179 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/INDEX
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/Meta/
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-rw-r--r-- root/root      3001 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/NAMESPACE
-rw-r--r-- root/root      1701 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/NEWS
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/R/
-rw-r--r-- root/root      1058 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/R/DRIMSeq
-rw-r--r-- root/root    351907 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/R/DRIMSeq.rdb
-rw-r--r-- root/root      3376 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/R/DRIMSeq.rdx
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/doc/
-rw-r--r-- root/root      8591 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/doc/DRIMSeq.R
-rw-r--r-- root/root     38213 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/doc/DRIMSeq.Rnw
-rw-r--r-- root/root    456881 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/doc/DRIMSeq.pdf
-rw-r--r-- root/root      1530 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/doc/index.html
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/help/
-rw-r--r-- root/root      3347 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/help/AnIndex
-rw-r--r-- root/root     92727 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/help/DRIMSeq.rdb
-rw-r--r-- root/root       623 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/help/DRIMSeq.rdx
-rw-r--r-- root/root       743 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/help/aliases.rds
-rw-r--r-- root/root       311 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/help/paths.rds
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/html/
-rw-r--r-- root/root     10543 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/html/00Index.html
-rw-r--r-- root/root      1335 2021-11-18 20:20 ./usr/lib/R/site-library/DRIMSeq/html/R.css
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/share/
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/share/doc/
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/share/doc/r-bioc-drimseq/
-rw-r--r-- root/root       258 2021-11-18 20:20 ./usr/share/doc/r-bioc-drimseq/changelog.Debian.gz
-rw-r--r-- root/root      1001 2021-11-18 20:20 ./usr/share/doc/r-bioc-drimseq/copyright
-rw-r--r-- root/root       399 2021-09-28 14:21 ./usr/share/doc/r-bioc-drimseq/run-unit-test
drwxr-xr-x root/root         0 2021-09-28 14:21 ./usr/share/doc/r-bioc-drimseq/tests/
drwxr-xr-x root/root         0 2021-11-18 20:20 ./usr/share/doc/r-bioc-drimseq/tests/testthat/
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Timestamp: 18.11.2021 / 21:01:30 (UTC)