Debian NEW package overview for r-bioc-decoupler
r-bioc-decoupler_2.2.0+dfsg-1_amd64.changes (click to toggle)
Format:1.8
Date:Fri, 13 May 2022 14:53:37 +0200
Source:r-bioc-decoupler
Binary:r-bioc-decoupler
Architecture:source all
Version:2.2.0+dfsg-1
Distribution:unstable
Urgency:medium
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By:Andreas Tille <tille@debian.org>
Description:
r-bioc-decoupler - infer biological activities from omics data
Closes:1010931
Changes:
r-bioc-decoupler (2.2.0+dfsg-1) unstable; urgency=medium

  * Initial release (closes: #1010931)
Files:
87d4c9f441f07569ef4a69b73e6059ca 2330 gnu-r optional r-bioc-decoupler_2.2.0+dfsg-1.dsc
1f19db8c49a77b1ab36f0f56d806e930 1957012 gnu-r optional r-bioc-decoupler_2.2.0+dfsg.orig.tar.xz
2be77d54ffac0175273f73e1e00349a7 2780 gnu-r optional r-bioc-decoupler_2.2.0+dfsg-1.debian.tar.xz
e63e4e1780f6deae4971447275eb33b1 2107752 gnu-r optional r-bioc-decoupler_2.2.0+dfsg-1_all.deb
035a3c715f087feb30d6a56b8b1f382c 11733 gnu-r optional r-bioc-decoupler_2.2.0+dfsg-1_amd64.buildinfo
r-bioc-decoupler_2.2.0+dfsg-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:r-bioc-decoupler
Binary:r-bioc-decoupler
Architecture:all
Version:2.2.0+dfsg-1
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders:Andreas Tille <tille@debian.org>
Homepage:https://bioconductor.org/packages/decoupleR/
Standards-Version:4.6.1
Vcs-Browser:https://salsa.debian.org/r-pkg-team/r-bioc-decoupler
Vcs-Git:https://salsa.debian.org/r-pkg-team/r-bioc-decoupler.git
Testsuite:autopkgtest, autopkgtest-pkg-r
Testsuite-Triggers:r-cran-testthat
Build-Depends:debhelper-compat (=13), dh-r, r-base-dev, r-cran-broom, r-cran-dplyr, r-cran-magrittr, r-cran-matrix, r-cran-purrr, r-cran-rlang, r-cran-stringr, r-cran-tibble, r-cran-tidyr, r-cran-tidyselect, r-cran-withr
Package-List:r-bioc-decoupler deb gnu-r optional arch=all
Files:
1f19db8c49a77b1ab36f0f56d806e930 1957012 r-bioc-decoupler_2.2.0+dfsg.orig.tar.xz
2be77d54ffac0175273f73e1e00349a7 2780 r-bioc-decoupler_2.2.0+dfsg-1.debian.tar.xz
lintian 2.94.0~bpo10+1 check for r-bioc-decoupler_2.2.0+dfsg-1.dsc (click to toggle)
README.source for r-bioc-decoupler_2.2.0+dfsg-1.dsc (click to toggle)
No README.source in this package
control file for r-bioc-decoupler_2.2.0+dfsg-1_all.deb (click to toggle)
Package:r-bioc-decoupler
Version:2.2.0+dfsg-1
Architecture:all
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size:2242
Depends:r-base-core (>=4.1.3.20220415-1), r-api-4.0, r-api-bioc-3.15, r-cran-broom, r-cran-dplyr, r-cran-magrittr, r-cran-matrix, r-cran-purrr, r-cran-rlang, r-cran-stringr, r-cran-tibble, r-cran-tidyr, r-cran-tidyselect, r-cran-withr
Recommends:r-cran-testthat
Suggests:r-cran-glmnet (>= 4.1.0), r-bioc-gsva, r-bioc-summarizedexperiment, r-cran-rpart, r-cran-ranger, r-bioc-biocstyle, r-cran-covr, r-cran-knitr, r-cran-rmarkdown, r-cran-roxygen2, r-cran-sessioninfo, r-cran-pheatmap, r-cran-seurat, r-cran-ggplot2, r-cran-ggrepel, r-cran-patchwork
Section:gnu-r
Priority:optional
Homepage:https://bioconductor.org/packages/decoupleR/
Description:
infer biological activities from omics data
 Many methods allow one to extract biological activities from omics
 data using information from prior knowledge resources, reducing the
 dimensionality for increased statistical power and better interpretability.
 DecoupleR is a Bioconductor package containing different
 statistical methods to extract these signatures within a unified framework.
 decoupleR allows the user to flexibly test any method with any resource.
 It incorporates methods that take into account the sign and weight of
 network interactions. decoupleR can be used with any omic, as long as its
 features can be linked to a biological process based on prior knowledge.
 For example, in transcriptomics gene sets regulated by a transcription
 factor, or in phospho-proteomics phosphosites that are targeted by a kinase.
lintian 2.94.0~bpo10+1 check for r-bioc-decoupler_2.2.0+dfsg-1_all.deb (click to toggle)
contents of r-bioc-decoupler_2.2.0+dfsg-1_all.deb (click to toggle)
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Timestamp: 13.05.2022 / 14:11:22 (UTC)