corner image corner image corner image corner image Debian NEW package overview for r-bioc-bioccheck
r-bioc-bioccheck_1.22.0+dfsg-1_amd64.changes (click to toggle)
Format:1.8
Date:Tue, 21 Apr 2020 21:56:43 +0200
Source:r-bioc-bioccheck
Binary:r-bioc-bioccheck
Architecture:source all
Version:1.22.0+dfsg-1
Distribution:unstable
Urgency:medium
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By:Dylan Aïssi <daissi@debian.org>
Description:
r-bioc-bioccheck - Bioconductor-specific package checks
Closes:958309
Changes:
r-bioc-bioccheck (1.22.0+dfsg-1) unstable; urgency=medium

  * Initial release (closes: #958309)
Files:
308b165128caffca327002dec9a9f911 2276 gnu-r optional r-bioc-bioccheck_1.22.0+dfsg-1.dsc
78ef5091abc39ed43a4138f315dfdb84 3971024 gnu-r optional r-bioc-bioccheck_1.22.0+dfsg.orig.tar.xz
1bdd0b653b9c461d38097c3d231464e1 5060 gnu-r optional r-bioc-bioccheck_1.22.0+dfsg-1.debian.tar.xz
9b5664a7d7a698e802d6e895c6b432f4 4156084 gnu-r optional r-bioc-bioccheck_1.22.0+dfsg-1_all.deb
d6c7d513905e1fef31881459b8fe6493 10035 gnu-r optional r-bioc-bioccheck_1.22.0+dfsg-1_amd64.buildinfo
r-bioc-bioccheck_1.22.0+dfsg-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:r-bioc-bioccheck
Binary:r-bioc-bioccheck
Architecture:all
Version:1.22.0+dfsg-1
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders:Dylan Aïssi <daissi@debian.org>
Homepage:https://bioconductor.org/packages/BiocCheck/
Standards-Version:4.5.0
Vcs-Browser:https://salsa.debian.org/r-pkg-team/r-bioc-bioccheck
Vcs-Git:https://salsa.debian.org/r-pkg-team/r-bioc-bioccheck.git
Testsuite:autopkgtest, autopkgtest-pkg-r
Testsuite-Triggers:r-cran-runit
Build-Depends:debhelper-compat (=12), dh-r, r-base-dev, r-bioc-biocviews, r-cran-biocmanager, r-cran-stringdist, r-bioc-graph, r-cran-httr, r-cran-optparse, r-cran-codetools, r-cran-knitr
Package-List:r-bioc-bioccheck deb gnu-r optional arch=all
Files:
78ef5091abc39ed43a4138f315dfdb84 3971024 r-bioc-bioccheck_1.22.0+dfsg.orig.tar.xz
1bdd0b653b9c461d38097c3d231464e1 5060 r-bioc-bioccheck_1.22.0+dfsg-1.debian.tar.xz
lintian 2.65.0~bpo10+1 check for r-bioc-bioccheck_1.22.0+dfsg-1.dsc (click to toggle)
README.source for r-bioc-bioccheck_1.22.0+dfsg-1.dsc (click to toggle)
Explanation for binary files inside source package according to
  https://lists.debian.org/debian-devel/2013/09/msg00332.html

Files: inst/unitTests/IRangesParsedCode.rda
  Test data used in inst/unitTests/test_BiocCheck.R

 -- Dylan Aïssi <daissi@debian.org>  Mon, 20 Apr 2020 14:04:34 +0200
control file for r-bioc-bioccheck_1.22.0+dfsg-1_all.deb (click to toggle)
Package:r-bioc-bioccheck
Version:1.22.0+dfsg-1
Architecture:all
Maintainer:Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size:4548
Depends:r-base-core (>=3.6.3-2), r-api-3.5, r-api-bioc-3.10, r-bioc-biocviews (>=1.33.7), r-cran-biocmanager, r-cran-stringdist, r-bioc-graph, r-cran-httr, r-cran-optparse, r-cran-codetools, r-cran-knitr
Recommends:r-cran-runit
Suggests:r-bioc-biocgenerics, r-bioc-biobase, r-cran-rmarkdown, r-cran-devtools (>= 1.4.1), r-cran-usethis
Section:gnu-r
Priority:optional
Homepage:https://bioconductor.org/packages/BiocCheck/
Description:
Bioconductor-specific package checks
 Executes Bioconductor-specific package checks.
lintian 2.65.0~bpo10+1 check for r-bioc-bioccheck_1.22.0+dfsg-1_all.deb (click to toggle)
contents of r-bioc-bioccheck_1.22.0+dfsg-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2020-04-21 19:56 ./
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/bin/
-rwxr-xr-x root/root       269 2019-10-29 20:22 ./usr/lib/R/bin/BiocCheck
-rwxr-xr-x root/root       277 2019-10-29 20:22 ./usr/lib/R/bin/BiocCheckGitClone
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/
-rw-r--r-- root/root      1303 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/DESCRIPTION
-rw-r--r-- root/root       248 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/INDEX
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/Meta/
-rw-r--r-- root/root       322 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/Meta/Rd.rds
-rw-r--r-- root/root       131 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/Meta/features.rds
-rw-r--r-- root/root       344 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/Meta/hsearch.rds
-rw-r--r-- root/root       142 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/Meta/links.rds
-rw-r--r-- root/root       492 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/Meta/nsInfo.rds
-rw-r--r-- root/root      1254 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/Meta/package.rds
-rw-r--r-- root/root       234 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/Meta/vignette.rds
-rw-r--r-- root/root       534 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/NAMESPACE
-rw-r--r-- root/root      3503 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/NEWS
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/R/
-rw-r--r-- root/root      1056 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/R/BiocCheck
-rw-r--r-- root/root    187635 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/R/BiocCheck.rdb
-rw-r--r-- root/root      2225 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/R/BiocCheck.rdx
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/doc/
-rw-r--r-- root/root       626 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/doc/BiocCheck.R
-rw-r--r-- root/root     24504 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/doc/BiocCheck.Rmd
-rw-r--r-- root/root      1386 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/doc/index.html
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/help/
-rw-r--r-- root/root        97 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/help/AnIndex
-rw-r--r-- root/root      7030 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/help/BiocCheck.rdb
-rw-r--r-- root/root       200 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/help/BiocCheck.rdx
-rw-r--r-- root/root       117 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/help/aliases.rds
-rw-r--r-- root/root       148 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/help/paths.rds
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/html/
-rw-r--r-- root/root      1757 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/html/00Index.html
-rw-r--r-- root/root      1335 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/html/R.css
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/script/
-rwxr-xr-x root/root       269 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/script/BiocCheck
-rw-r--r-- root/root       226 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/script/BiocCheck.bat
-rwxr-xr-x root/root       277 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/script/BiocCheckGitClone
-rw-r--r-- root/root       234 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/script/BiocCheckGitClone.bat
-rw-r--r-- root/root       732 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/script/checkBadDeps.R
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testfiles/
-rw-r--r-- root/root       126 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testfiles/directSlotAccess.Rmd
-rw-r--r-- root/root       121 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testfiles/noDirectSlotAccess.Rmd
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/
-rw-r--r-- root/root       230 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/DESCRIPTION
-rw-r--r-- root/root        28 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/NAMESPACE
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/R/
-rw-r--r-- root/root       143 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/R/bad_coding.R
-rw-r--r-- root/root       145 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/R/baddeps.R
-rw-r--r-- root/root       719 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/R/has-devel.r
-rw-r--r-- root/root       281 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/R/morebadcode.R
-rw-r--r-- root/root       147 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/R/morecode.R
-rw-r--r-- root/root       426 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/R/parseme.R
-rw-r--r-- root/root       448 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/R/requireme.R
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/man/
-rw-r--r-- root/root      1294 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/man/a.Rd
-rw-r--r-- root/root      1066 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/man/baddep.Rd
-rw-r--r-- root/root       708 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/man/has-devel.Rd
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/tests/
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/tests/testthat/
-rw-r--r-- root/root        56 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/tests/testthat/a_test.R
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/vignettes/
-rw-r--r-- root/root        82 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg0/vignettes/testpkg0.Rmd
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg1/
-rw-r--r-- root/root       196 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg1/DESCRIPTION
-rw-r--r-- root/root         2 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg1/NAMESPACE
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg1/R/
-rw-r--r-- root/root       186 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg1/R/zzz.R
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg1/src/
-rw-r--r-- root/root        85 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg1/src/testpkg1.c
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg2/
-rw-r--r-- root/root       227 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg2/DESCRIPTION
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg2/vignettes/
-rw-r--r-- root/root       105 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/testpackages/testpkg2/vignettes/testpkg0.Rmd
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drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/unitTests/
-rw-r--r-- root/root   4297602 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/unitTests/IRangesParsedCode.rda
-rw-r--r-- root/root     28046 2020-04-21 19:56 ./usr/lib/R/site-library/BiocCheck/unitTests/test_BiocCheck.R
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/share/
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-04-21 19:56 ./usr/share/doc/r-bioc-bioccheck/
-rw-r--r-- root/root       169 2020-04-21 19:56 ./usr/share/doc/r-bioc-bioccheck/changelog.Debian.gz
-rw-r--r-- root/root      9806 2020-04-21 19:56 ./usr/share/doc/r-bioc-bioccheck/copyright
-rw-r--r-- root/root       412 2020-04-21 19:56 ./usr/share/doc/r-bioc-bioccheck/run-unit-test
drwxr-xr-x root/root         0 2019-10-29 20:22 ./usr/share/doc/r-bioc-bioccheck/tests/
-rw-r--r-- root/root        41 2019-10-29 20:22 ./usr/share/doc/r-bioc-bioccheck/tests/runTests.R

Timestamp: 21.04.2020 / 22:01:42 (UTC)