Debian NEW package overview for python-weblogo
python-weblogo_3.7.12-1_amd64.changes (click to toggle)
Format:1.8
Date:Thu, 22 Sep 2022 02:49:19 -0000
Source:python-weblogo
Binary:python3-weblogo
Architecture:source all
Version:3.7.12-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Python Team <team+python@tracker.debian.org>
Changed-By:Andrius Merkys <merkys@debian.org>
Description:
python3-weblogo - sequence logo generator
Closes:1016906
Changes:
python-weblogo (3.7.12-1) unstable; urgency=medium

  * Initial release. (Closes: #1016906)
Files:
2106780338d81f180a31c49949874098 2287 science optional python-weblogo_3.7.12-1.dsc
9cad2105a308da8c1ba18223f1a03d5f 934475 science optional python-weblogo_3.7.12.orig.tar.gz
7ea12ac0ab4b4cdeb26603f570b35093 7816 science optional python-weblogo_3.7.12-1.debian.tar.xz
deb716e388c2c35d533cdc721884a9e5 10373 science optional python-weblogo_3.7.12-1_amd64.buildinfo
b2da1725509aa603a338cd014b951436 112108 science optional python3-weblogo_3.7.12-1_all.deb
python-weblogo_3.7.12-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:python-weblogo
Binary:python3-weblogo
Architecture:all
Version:3.7.12-1
Maintainer:Debian Python Team <team+python@tracker.debian.org>
Uploaders:Andrius Merkys <merkys@debian.org>,
Homepage:https://github.com/WebLogo/weblogo
Standards-Version:4.6.1
Vcs-Browser:https://salsa.debian.org/python-team/packages/python-weblogo
Vcs-Git:https://salsa.debian.org/python-team/packages/python-weblogo.git
Testsuite:autopkgtest, autopkgtest-pkg-python
Testsuite-Triggers:ghostscript, python3-pytest
Build-Depends:debhelper-compat (=13), dh-python, ghostscript<!nocheck>, help2man, python3-all-dev, python3-numpy, python3-pytest<!nocheck>, python3-scipy<!nocheck>, python3-setuptools, python3-setuptools-scm
Package-List:python3-weblogo deb science optional arch=all
Files:
9cad2105a308da8c1ba18223f1a03d5f 934475 python-weblogo_3.7.12.orig.tar.gz
7ea12ac0ab4b4cdeb26603f570b35093 7816 python-weblogo_3.7.12-1.debian.tar.xz
lintian 2.104.0 check for python-weblogo_3.7.12-1.dsc (click to toggle)
README.source for python-weblogo_3.7.12-1.dsc (click to toggle)
No README.source in this package
control file for python3-weblogo_3.7.12-1_all.deb (click to toggle)
Package:python3-weblogo
Source:python-weblogo
Version:3.7.12-1
Architecture:all
Maintainer:Debian Python Team <team+python@tracker.debian.org>
Installed-Size:563
Depends:libjs-bootstrap, python3-numpy, python3-pkg-resources, python3-scipy, python3:any
Section:science
Priority:optional
Homepage:https://github.com/WebLogo/weblogo
Description:
sequence logo generator
 WebLogo is a web based application designed to make the generation of sequence
 logos.
 .
 WebLogo can create output in several common graphics formats, including the
 bitmap formats GIF and PNG, suitable for on-screen display, and the vector
 formats EPS and PDF, more suitable for printing, publication, and further
 editing. Additional graphics options include bitmap resolution, titles,
 optional axis, and axis labels, antialiasing, error bars, and alternative
 symbol formats.
 .
 A sequence logo is a graphical representation of an amino acid or nucleic acid
 multiple sequence alignment. Each logo consists of stacks of symbols, one
 stack for each position in the sequence. The overall height of the stack
 indicates the sequence conservation at that position, while the height of
 symbols within the stack indicates the relative frequency of each amino or
 nucleic acid at that position. The width of the stack is proportional to the
 fraction of valid symbols in that position.
lintian 2.104.0 check for python3-weblogo_3.7.12-1_all.deb (click to toggle)
contents of python3-weblogo_3.7.12-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2022-09-22 02:49 ./
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/bin/
-rwxr-xr-x root/root       971 2022-09-22 02:49 ./usr/bin/transformseq
-rwxr-xr-x root/root       961 2022-09-22 02:49 ./usr/bin/weblogo
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/lib/
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/lib/python3/
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/lib/python3/dist-packages/weblogo/
-rw-r--r-- root/root       377 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/__init__.py
-rw-r--r-- root/root     19358 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/_cgi.py
-rw-r--r-- root/root     28618 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/_cli.py
-rw-r--r-- root/root      4599 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/_transformseq.py
-rw-r--r-- root/root     13193 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/color.py
-rw-r--r-- root/root      7547 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/colorscheme.py
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/lib/python3/dist-packages/weblogo/data/
-rw-r--r-- root/root      2176 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data/blosum100.mat
-rw-r--r-- root/root      2124 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data/blosum35.mat
-rw-r--r-- root/root      2124 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data/blosum40.mat
-rw-r--r-- root/root      2124 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data/blosum45.mat
-rw-r--r-- root/root      2072 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data/blosum50.mat
-rw-r--r-- root/root      2126 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data/blosum62.mat
-rw-r--r-- root/root      2126 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data/blosum80.mat
-rw-r--r-- root/root     24844 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data/dbxref.txt
-rw-r--r-- root/root      2224 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data/dist20_comp.mat
-rw-r--r-- root/root      1922 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data/pam120.mat
-rw-r--r-- root/root      1923 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data/pam250.mat
-rw-r--r-- root/root     13851 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/data.py
-rw-r--r-- root/root     34976 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/logo.py
-rw-r--r-- root/root     13035 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/logo_formatter.py
-rw-r--r-- root/root     10092 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/logomath.py
-rw-r--r-- root/root     15674 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/matrix.py
-rw-r--r-- root/root     24734 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq.py
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/lib/python3/dist-packages/weblogo/seq_io/
-rw-r--r-- root/root      9221 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/__init__.py
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/lib/python3/dist-packages/weblogo/seq_io/_nexus/
-rw-r--r-- root/root      5483 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/_nexus/Nodes.py
-rw-r--r-- root/root     39743 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/_nexus/Trees.py
-rw-r--r-- root/root     79601 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/_nexus/__init__.py
-rw-r--r-- root/root      4680 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/array_io.py
-rw-r--r-- root/root      7931 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/clustal_io.py
-rw-r--r-- root/root      7590 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/fasta_io.py
-rw-r--r-- root/root      1752 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/seq_io/genbank_io.py
-rw-r--r-- root/root      6231 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/intelligenetics_io.py
-rw-r--r-- root/root      5796 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/msf_io.py
-rw-r--r-- root/root      5976 2022-09-06 07:29 ./usr/lib/python3/dist-packages/weblogo/seq_io/nbrf_io.py
-rw-r--r-- root/root      2514 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/nexus_io.py
-rw-r--r-- root/root      2117 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/null_io.py
-rw-r--r-- root/root      6399 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/phylip_io.py
-rw-r--r-- root/root      4449 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/plain_io.py
-rw-r--r-- root/root      5616 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/stockholm_io.py
-rw-r--r-- root/root      3924 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/seq_io/table_io.py
-rw-r--r-- root/root     15926 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/template.eps
-rw-r--r-- root/root     35138 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/transform.py
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/lib/python3/dist-packages/weblogo/utils/
-rw-r--r-- root/root      8102 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/utils/__init__.py
-rw-r--r-- root/root      7769 2022-09-20 11:39 ./usr/lib/python3/dist-packages/weblogo/utils/deoptparse.py
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/lib/python3/dist-packages/weblogo-3.7.12.egg-info/
-rw-r--r-- root/root      1466 2022-09-22 02:49 ./usr/lib/python3/dist-packages/weblogo-3.7.12.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2022-09-22 02:49 ./usr/lib/python3/dist-packages/weblogo-3.7.12.egg-info/dependency_links.txt
-rw-r--r-- root/root        88 2022-09-22 02:49 ./usr/lib/python3/dist-packages/weblogo-3.7.12.egg-info/entry_points.txt
-rw-r--r-- root/root         0 2022-09-22 02:49 ./usr/lib/python3/dist-packages/weblogo-3.7.12.egg-info/requires.txt
-rw-r--r-- root/root         8 2022-09-22 02:49 ./usr/lib/python3/dist-packages/weblogo-3.7.12.egg-info/top_level.txt
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/share/
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/share/doc/
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/share/doc/python3-weblogo/
-rw-r--r-- root/root       164 2022-09-22 02:49 ./usr/share/doc/python3-weblogo/changelog.Debian.gz
-rw-r--r-- root/root        61 2022-09-06 07:29 ./usr/share/doc/python3-weblogo/changelog.gz
-rw-r--r-- root/root     19939 2022-09-22 02:49 ./usr/share/doc/python3-weblogo/copyright
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/share/man/
drwxr-xr-x root/root         0 2022-09-22 02:49 ./usr/share/man/man1/
-rw-r--r-- root/root       648 2022-09-22 02:49 ./usr/share/man/man1/transformseq.1.gz
-rw-r--r-- root/root      2660 2022-09-22 02:49 ./usr/share/man/man1/weblogo.1.gz

Timestamp: 22.09.2022 / 08:11:41 (UTC)