Debian NEW package overview for python-pangolearn
python-pangolearn_2021-04-01-1_amd64.changes (click to toggle)
Format:1.8
Date:Tue, 06 Apr 2021 16:37:52 +0200
Source:python-pangolearn
Binary:python3-pangolearn
Architecture:source all
Version:2021-04-01-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Andreas Tille <tille@debian.org>
Description:
python3-pangolearn - store of the trained model for pangolin to access
Closes:986458
Changes:
python-pangolearn (2021-04-01-1) unstable; urgency=medium

  * Initial release (Closes: #986458)
Files:
6ba6bd85055bd7c8a261ccc60020e5e2 2160 science optional python-pangolearn_2021-04-01-1.dsc
3e29918bae8d9dc5bb4b81b458a5ff66 7130002 science optional python-pangolearn_2021-04-01.orig.tar.gz
968b73c8796f774d45910bfb17ead5c9 2064 science optional python-pangolearn_2021-04-01-1.debian.tar.xz
fca93fa49cea0efab6c7a43e13378194 6331 science optional python-pangolearn_2021-04-01-1_amd64.buildinfo
fbb4e2f0146fed0475d567939dc251b7 4347880 python optional python3-pangolearn_2021-04-01-1_all.deb
python-pangolearn_2021-04-01-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:python-pangolearn
Binary:python3-pangolearn
Architecture:all
Version:2021-04-01-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Andreas Tille <tille@debian.org>
Homepage:https://github.com/cov-lineages/pangoLEARN
Standards-Version:4.5.1
Vcs-Browser:https://salsa.debian.org/med-team/python-pangolearn
Vcs-Git:https://salsa.debian.org/med-team/python-pangolearn.git
Testsuite:autopkgtest-pkg-python
Build-Depends:debhelper-compat (=13), dh-python, python3-all, python3-setuptools
Package-List:python3-pangolearn deb python optional arch=all
Files:
3e29918bae8d9dc5bb4b81b458a5ff66 7130002 python-pangolearn_2021-04-01.orig.tar.gz
968b73c8796f774d45910bfb17ead5c9 2064 python-pangolearn_2021-04-01-1.debian.tar.xz
lintian 2.94.0~bpo10+1 check for python-pangolearn_2021-04-01-1.dsc (click to toggle)
README.source for python-pangolearn_2021-04-01-1.dsc (click to toggle)
No README.source in this package
control file for python3-pangolearn_2021-04-01-1_all.deb (click to toggle)
Package:python3-pangolearn
Source:python-pangolearn
Version:2021-04-01-1
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:100488
Depends:python3:any
Suggests:mafft, iqtree
Section:python
Priority:optional
Homepage:https://github.com/cov-lineages/pangoLEARN
Description:
store of the trained model for pangolin to access
 Pangolin runs a multinomial logistic regression model trained against
 lineage assignments based on GISAID data.
 .
 Legacy pangolin runs using a guide tree and alignment hosted at
 cov-lineages/lineages. Some of this data is sourced from GISAID, but
 anonymised and encrypted to fit with guidelines. Appropriate permissions
 have been given and acknowledgements for the teams that have worked to
 provide the original SARS-CoV-2 genome sequences to GISAID are also
 hosted here.
 .
 This package contains the store of the trained model for pangolin.
lintian 2.94.0~bpo10+1 check for python3-pangolearn_2021-04-01-1_all.deb (click to toggle)
contents of python3-pangolearn_2021-04-01-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2021-04-06 14:37 ./
drwxr-xr-x root/root         0 2021-04-06 14:37 ./usr/
drwxr-xr-x root/root         0 2021-04-06 14:37 ./usr/lib/
drwxr-xr-x root/root         0 2021-04-06 14:37 ./usr/lib/python3/
drwxr-xr-x root/root         0 2021-04-06 14:37 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2021-04-06 14:37 ./usr/lib/python3/dist-packages/pangoLEARN/
-rw-r--r-- root/root        51 2021-04-02 09:19 ./usr/lib/python3/dist-packages/pangoLEARN/__init__.py
drwxr-xr-x root/root         0 2021-04-06 14:37 ./usr/lib/python3/dist-packages/pangoLEARN/data/
-rw-r--r-- root/root     56082 2021-04-02 09:19 ./usr/lib/python3/dist-packages/pangoLEARN/data/decisionTreeHeaders_v1.joblib
-rw-r--r-- root/root    958852 2021-04-02 09:19 ./usr/lib/python3/dist-packages/pangoLEARN/data/decisionTree_v1.joblib
-rw-r--r-- root/root  48464607 2021-04-02 09:19 ./usr/lib/python3/dist-packages/pangoLEARN/data/decision_tree_rules.txt
-rw-r--r-- root/root     31117 2021-04-02 09:19 ./usr/lib/python3/dist-packages/pangoLEARN/data/lineage_recall_report.csv
-rw-r--r-- root/root   5784953 2021-04-02 09:19 ./usr/lib/python3/dist-packages/pangoLEARN/data/lineages.downsample.csv
-rw-r--r-- root/root  47579080 2021-04-02 09:19 ./usr/lib/python3/dist-packages/pangoLEARN/data/lineages.metadata.csv
drwxr-xr-x root/root         0 2021-04-06 14:37 ./usr/lib/python3/dist-packages/pangoLEARN-2021_04_01.egg-info/
-rw-r--r-- root/root       261 2021-04-06 14:37 ./usr/lib/python3/dist-packages/pangoLEARN-2021_04_01.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2021-04-06 14:37 ./usr/lib/python3/dist-packages/pangoLEARN-2021_04_01.egg-info/dependency_links.txt
-rw-r--r-- root/root        74 2021-04-06 14:37 ./usr/lib/python3/dist-packages/pangoLEARN-2021_04_01.egg-info/entry_points.txt
-rw-r--r-- root/root         1 2021-04-06 14:37 ./usr/lib/python3/dist-packages/pangoLEARN-2021_04_01.egg-info/not-zip-safe
-rw-r--r-- root/root        11 2021-04-06 14:37 ./usr/lib/python3/dist-packages/pangoLEARN-2021_04_01.egg-info/top_level.txt
drwxr-xr-x root/root         0 2021-04-06 14:37 ./usr/share/
drwxr-xr-x root/root         0 2021-04-06 14:37 ./usr/share/doc/
drwxr-xr-x root/root         0 2021-04-06 14:37 ./usr/share/doc/python3-pangolearn/
-rw-r--r-- root/root       165 2021-04-06 14:37 ./usr/share/doc/python3-pangolearn/changelog.Debian.gz
-rw-r--r-- root/root       923 2021-04-06 14:37 ./usr/share/doc/python3-pangolearn/copyright

Timestamp: 06.04.2021 / 16:00:57 (UTC)