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python-loompy_2.0.17+dfsg-1_amd64.changes (click to toggle)
Format:1.8
Date:Mon, 12 Aug 2019 13:14:47 +0200
Source:python-loompy
Binary:python3-loompy
Architecture:source all
Version:2.0.17+dfsg-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
python3-loompy - access loom formatted files for bioinformatics
Closes:934597
Changes:
python-loompy (2.0.17+dfsg-1) unstable; urgency=medium

  * Initial release (Closes: #934597)
  * TODO:
    - package documentation
Files:
ab7bb17deb7df0ce97a1318cfe6e22d5 2107 science optional python-loompy_2.0.17+dfsg-1.dsc
cb45f02df4ee9ef6595010f3132180c1 15494256 science optional python-loompy_2.0.17+dfsg.orig.tar.xz
ba917fb5321b8c8cbcac05a53e4b4a58 2388 science optional python-loompy_2.0.17+dfsg-1.debian.tar.xz
d6e3b1d761a91fa87201c419ab4daa66 6619 science optional python-loompy_2.0.17+dfsg-1_amd64.buildinfo
43677dfa771eab25dad0f6f68f150ebf 27144 science optional python3-loompy_2.0.17+dfsg-1_all.deb
python-loompy_2.0.17+dfsg-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:python-loompy
Binary:python3-loompy
Architecture:all
Version:2.0.17+dfsg-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Steffen Moeller <moeller@debian.org>
Homepage:https://github.com/linnarsson-lab/loompy
Standards-Version:4.4.0
Vcs-Browser:https://salsa.debian.org/med-team/python-loompy
Vcs-Git:https://salsa.debian.org/med-team/python-loompy.git
Build-Depends:debhelper (>=11), dh-python, python3-all, python3-setuptools, python3-h5py
Package-List:python3-loompy deb science optional arch=all
Files:
cb45f02df4ee9ef6595010f3132180c1 15494256 python-loompy_2.0.17+dfsg.orig.tar.xz
ba917fb5321b8c8cbcac05a53e4b4a58 2388 python-loompy_2.0.17+dfsg-1.debian.tar.xz
lintian 2.16.0~bpo9+1 check for python-loompy_2.0.17+dfsg-1.dsc (click to toggle)
README.source for python-loompy_2.0.17+dfsg-1.dsc (click to toggle)
python-loompy for Debian
-----------------------

The folder doc/_build was removed.

 -- Steffen Moeller <moeller@debian.org>  Mon, 12 Aug 2019 13:14:47 +0200

control file for python3-loompy_2.0.17+dfsg-1_all.deb (click to toggle)
Package:python3-loompy
Source:python-loompy
Version:2.0.17+dfsg-1
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:131
Depends:python3-h5py, python3-numpy, python3-pandas, python3-pkg-resources, python3-scipy, python3:any
Section:science
Priority:optional
Homepage:https://github.com/linnarsson-lab/loompy
Description:
access loom formatted files for bioinformatics
 Loom is an efficient file format for very large omics datasets,
 consisting of a main matrix, optional additional layers, a variable
 number of row and column annotations. Loom also supports sparse
 graphs. We use loom files to store single-cell gene expression data:
 the main matrix contains the actual expression values (one column per
 cell, one row per gene); row and column annotations contain metadata
 for genes and cells, such as Name, Chromosome, Position (for genes),
 and Strain, Sex, Age (for cells).
 .
 Loom files (.loom) are created in the HDF5 file format, which supports
 an internal collection of numerical multidimensional datasets. HDF5
 is supported by many computer languages, including Java, MATLAB,
 Mathematica, Python, R, and Julia. .loom files are accessible from any
 language that supports HDF5.
lintian 2.16.0~bpo9+1 check for python3-loompy_2.0.17+dfsg-1_all.deb (click to toggle)
contents of python3-loompy_2.0.17+dfsg-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2019-08-12 11:14 ./
drwxr-xr-x root/root         0 2019-08-12 11:14 ./usr/
drwxr-xr-x root/root         0 2019-08-12 11:14 ./usr/lib/
drwxr-xr-x root/root         0 2019-08-12 11:14 ./usr/lib/python3/
drwxr-xr-x root/root         0 2019-08-12 11:14 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/
-rw-r--r-- root/root       626 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/__init__.py
-rw-r--r-- root/root        51 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/_version.py
-rw-r--r-- root/root      6905 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/attribute_manager.py
-rw-r--r-- root/root      9148 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/color.py
-rw-r--r-- root/root      2559 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/file_attribute_manager.py
-rw-r--r-- root/root      6750 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/graph_manager.py
-rw-r--r-- root/root      5328 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/layer_manager.py
-rw-r--r-- root/root      7856 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/loom_layer.py
-rw-r--r-- root/root     14894 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/loom_validator.py
-rw-r--r-- root/root      2060 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/loom_view.py
-rw-r--r-- root/root     43909 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/loompy.py
-rw-r--r-- root/root      3872 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/normalize.py
-rw-r--r-- root/root      1846 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/to_html.py
-rw-r--r-- root/root       399 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/utils.py
-rw-r--r-- root/root      1013 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy/view_manager.py
drwxr-xr-x root/root         0 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy-2.0.17.egg-info/
-rw-r--r-- root/root       448 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy-2.0.17.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy-2.0.17.egg-info/dependency_links.txt
-rw-r--r-- root/root        21 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy-2.0.17.egg-info/requires.txt
-rw-r--r-- root/root         7 2019-08-12 11:14 ./usr/lib/python3/dist-packages/loompy-2.0.17.egg-info/top_level.txt
drwxr-xr-x root/root         0 2019-08-12 11:14 ./usr/share/
drwxr-xr-x root/root         0 2019-08-12 11:14 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-08-12 11:14 ./usr/share/doc/python3-loompy/
-rw-r--r-- root/root       195 2019-08-12 11:14 ./usr/share/doc/python3-loompy/changelog.Debian.gz
-rw-r--r-- root/root      1587 2019-08-12 11:14 ./usr/share/doc/python3-loompy/copyright

Timestamp: 12.08.2019 / 13:01:45 (UTC)