corner image corner image corner image corner image Debian NEW package overview for python-deeptools
python-deeptools_3.3.1-1_amd64.changes (click to toggle)
Format:1.8
Date:Thu, 26 Sep 2019 14:37:35 +0200
Source:python-deeptools
Binary:python3-deeptools
Architecture:source all
Version:3.3.1-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
python3-deeptools - platform for exploring biological deep-sequencing data
Closes:934321
Changes:
python-deeptools (3.3.1-1) unstable; urgency=medium

  * Initial release (Closes: #934321)
Files:
12c8cd2ec9a58ef37609a775536b4aa9 2342 science optional python-deeptools_3.3.1-1.dsc
8927a8b7324129f6a4a34326b84a21a1 62539971 science optional python-deeptools_3.3.1.orig.tar.gz
eb8f81b07e22c4a827b4fbd23e34c2e6 4104 science optional python-deeptools_3.3.1-1.debian.tar.xz
e929c09b8b770c0bcf34497d916a0bc4 9061 science optional python-deeptools_3.3.1-1_amd64.buildinfo
7ede62db4645d2fff585137f1906e077 3069488 science optional python3-deeptools_3.3.1-1_all.deb
python-deeptools_3.3.1-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:python-deeptools
Binary:python3-deeptools
Architecture:all
Version:3.3.1-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Steffen Moeller <moeller@debian.org>
Homepage:https://github.com/deeptools/deepTools
Standards-Version:4.4.0
Vcs-Browser:https://salsa.debian.org/med-team/python-deeptools
Vcs-Git:https://salsa.debian.org/med-team/python-deeptools.git
Build-Depends:debhelper (>=11), dh-python, python3-all, python3-setuptools, python3-numpy (>=1.9.0), python3-scipy (>=0.17.0), python3-matplotlib (>=2.1.2), python3-pysam (>=0.14.0), python3-py2bit (>=0.2.0), python3-numpydoc (>=0.5), python3-pybigwig (>=0.2.1), python3-plotly (>=2.0.0), python3-deeptoolsintervals (>=0.1.8)
Package-List:python3-deeptools deb science optional arch=all
Files:
8927a8b7324129f6a4a34326b84a21a1 62539971 python-deeptools_3.3.1.orig.tar.gz
eb8f81b07e22c4a827b4fbd23e34c2e6 4104 python-deeptools_3.3.1-1.debian.tar.xz
lintian 2.21.0~bpo9+1 check for python-deeptools_3.3.1-1.dsc (click to toggle)
N: Ignoring their little gimmic for the documentation
O: python-deeptools source: source-is-missing docs/_static/welcome_owl.carousel.min.js
README.source for python-deeptools_3.3.1-1.dsc (click to toggle)
Changes on source tree of deeptools
===================================

python2to3_for_executables.patch
	The shebang line is adjusted to /usr/bin/python3

deactivateFailingPatch.patch
	Following an exchange with upstream on
	https://github.com/deeptools/deepTools/issues/858
	this is considered to be an artifact of version dependencies
	of the matplotlib.
control file for python3-deeptools_3.3.1-1_all.deb (click to toggle)
Package:python3-deeptools
Source:python-deeptools
Version:3.3.1-1
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:8867
Depends:python3-deeptoolsintervals (>=0.1.8), python3-matplotlib (>=2.1.2), python3-numpy (>=1.9.0), python3-numpydoc (>=0.5), python3-plotly (>=2.0.0), python3-py2bit (>=0.2.0), python3-pybigwig (>=0.2.1), python3-pysam (>=0.14.0), python3-scipy (>=0.17.0), python3:any
Section:science
Priority:optional
Homepage:https://github.com/deeptools/deepTools
Description:
platform for exploring biological deep-sequencing data
 Aiming for compatibility with the Galaxy worklfow environment, but
 also independently contributing to a series of workflows in
 genomics, this package provides a series of tools to address
 common tasks for the processing of high-throughput DNA/RNA sequencing.
lintian 2.21.0~bpo9+1 check for python3-deeptools_3.3.1-1_all.deb (click to toggle)
W: python3-deeptools: binary-without-manpage usr/bin/alignmentSieve
W: python3-deeptools: binary-without-manpage usr/bin/bamCompare
W: python3-deeptools: binary-without-manpage usr/bin/bamCoverage
W: python3-deeptools: binary-without-manpage usr/bin/bamPEFragmentSize
W: python3-deeptools: binary-without-manpage usr/bin/bigwigCompare
W: python3-deeptools: binary-without-manpage usr/bin/computeGCBias
W: python3-deeptools: binary-without-manpage usr/bin/computeMatrix
W: python3-deeptools: binary-without-manpage usr/bin/computeMatrixOperations
W: python3-deeptools: binary-without-manpage usr/bin/correctGCBias
W: python3-deeptools: binary-without-manpage usr/bin/deeptools
W: python3-deeptools: binary-without-manpage usr/bin/estimateReadFiltering
W: python3-deeptools: binary-without-manpage usr/bin/estimateScaleFactor
W: python3-deeptools: binary-without-manpage usr/bin/multiBamSummary
W: python3-deeptools: binary-without-manpage usr/bin/multiBigwigSummary
W: python3-deeptools: binary-without-manpage usr/bin/plotCorrelation
W: python3-deeptools: binary-without-manpage usr/bin/plotCoverage
W: python3-deeptools: binary-without-manpage usr/bin/plotEnrichment
W: python3-deeptools: binary-without-manpage usr/bin/plotFingerprint
W: python3-deeptools: binary-without-manpage usr/bin/plotHeatmap
W: python3-deeptools: binary-without-manpage usr/bin/plotPCA
W: python3-deeptools: binary-without-manpage usr/bin/plotProfile
contents of python3-deeptools_3.3.1-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2019-09-26 12:37 ./
drwxr-xr-x root/root         0 2019-09-26 12:37 ./usr/
drwxr-xr-x root/root         0 2019-09-26 12:37 ./usr/bin/
-rwxr-xr-x root/root       230 2019-09-26 12:37 ./usr/bin/alignmentSieve
-rwxr-xr-x root/root       226 2019-09-26 12:37 ./usr/bin/bamCompare
-rwxr-xr-x root/root       227 2019-09-26 12:37 ./usr/bin/bamCoverage
-rwxr-xr-x root/root       233 2019-09-26 12:37 ./usr/bin/bamPEFragmentSize
-rwxr-xr-x root/root       229 2019-09-26 12:37 ./usr/bin/bigwigCompare
-rwxr-xr-x root/root       229 2019-09-26 12:37 ./usr/bin/computeGCBias
-rwxr-xr-x root/root       323 2019-09-26 12:37 ./usr/bin/computeMatrix
-rwxr-xr-x root/root       239 2019-09-26 12:37 ./usr/bin/computeMatrixOperations
-rwxr-xr-x root/root       229 2019-09-26 12:37 ./usr/bin/correctGCBias
-rwxr-xr-x root/root       236 2019-09-26 12:37 ./usr/bin/deeptools
-rwxr-xr-x root/root       238 2019-09-26 12:37 ./usr/bin/estimateReadFiltering
-rwxr-xr-x root/root      4660 2019-09-26 12:37 ./usr/bin/estimateScaleFactor
-rwxr-xr-x root/root       323 2019-09-26 12:37 ./usr/bin/multiBamSummary
-rwxr-xr-x root/root       326 2019-09-26 12:37 ./usr/bin/multiBigwigSummary
-rwxr-xr-x root/root       231 2019-09-26 12:37 ./usr/bin/plotCorrelation
-rwxr-xr-x root/root       229 2019-09-26 12:37 ./usr/bin/plotCoverage
-rwxr-xr-x root/root       231 2019-09-26 12:37 ./usr/bin/plotEnrichment
-rwxr-xr-x root/root       231 2019-09-26 12:37 ./usr/bin/plotFingerprint
-rwxr-xr-x root/root       227 2019-09-26 12:37 ./usr/bin/plotHeatmap
-rwxr-xr-x root/root       229 2019-09-26 12:37 ./usr/bin/plotPCA
-rwxr-xr-x root/root       227 2019-09-26 12:37 ./usr/bin/plotProfile
drwxr-xr-x root/root         0 2019-09-26 12:37 ./usr/lib/
drwxr-xr-x root/root         0 2019-09-26 12:37 ./usr/lib/python3/
drwxr-xr-x root/root         0 2019-09-26 12:37 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2019-09-26 12:37 ./usr/lib/python3/dist-packages/deepTools-3.3.1.egg-info/
-rw-r--r-- root/root      2131 2019-09-26 12:37 ./usr/lib/python3/dist-packages/deepTools-3.3.1.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2019-09-26 12:37 ./usr/lib/python3/dist-packages/deepTools-3.3.1.egg-info/dependency_links.txt
-rw-r--r-- root/root         0 2019-09-26 12:37 ./usr/lib/python3/dist-packages/deepTools-3.3.1.egg-info/requires.txt
-rw-r--r-- root/root        10 2019-09-26 12:37 ./usr/lib/python3/dist-packages/deepTools-3.3.1.egg-info/top_level.txt
-rw-r--r-- root/root         1 2019-08-09 17:31 ./usr/lib/python3/dist-packages/deepTools-3.3.1.egg-info/zip-safe
drwxr-xr-x root/root         0 2019-09-26 12:37 ./usr/lib/python3/dist-packages/deeptools/
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Timestamp: 26.09.2019 / 14:14:18 (UTC)