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python-cooler_0.8.7-1_amd64.changes (click to toggle)
Format:1.8
Date:Mon, 15 Jun 2020 09:42:55 +0200
Source:python-cooler
Binary:python3-cooler python3-cooler-examples
Architecture:source all
Version:0.8.7-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Andreas Tille <tille@debian.org>
Description:
python3-cooler - library for a sparse, compressed, binary persistent storage
python3-cooler-examples - library for a sparse, compressed, binary persistent storage (exam
Closes:962792
Changes:
python-cooler (0.8.7-1) unstable; urgency=medium

  * Initial release (Closes: #962792)
Files:
3e0937738bac566a5bd9ba11685af98b 2457 science optional python-cooler_0.8.7-1.dsc
e52721b89e042dc26e30a9d0bcfe0f2f 10186542 science optional python-cooler_0.8.7.orig.tar.gz
6a3b006a5a74c750893392295077e7b3 4248 science optional python-cooler_0.8.7-1.debian.tar.xz
620fcc8b1b980ae9b036d5d2e7eebb63 7081 science optional python-cooler_0.8.7-1_amd64.buildinfo
ba941d7d87416ff7154179aea5c57732 8138088 python optional python3-cooler-examples_0.8.7-1_all.deb
9b5b3cc06c77f81348eb8c56b6119fc1 75992 python optional python3-cooler_0.8.7-1_all.deb
python-cooler_0.8.7-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:python-cooler
Binary:python3-cooler, python3-cooler-examples
Architecture:all
Version:0.8.7-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Andreas Tille <tille@debian.org>
Homepage:https://github.com/mirnylab/cooler
Standards-Version:4.5.0
Vcs-Browser:https://salsa.debian.org/med-team/python-cooler
Vcs-Git:https://salsa.debian.org/med-team/python-cooler.git
Testsuite:autopkgtest
Testsuite-Triggers:python3-dask, python3-mock, python3-pytest
Build-Depends:debhelper-compat (=13), dh-python, python3-all, python3-setuptools, python3-simplejson<!nocheck>, python3-six<!nocheck>, python3-pandas<!nocheck>, python3-scipy<!nocheck>, python3-h5py<!nocheck>, python3-asciitree<!nocheck>, python3-multiprocess<!nocheck>, python3-click<!nocheck>, python3-cytoolz<!nocheck>
Package-List:python3-cooler deb python optional arch=all python3-cooler-examples deb python optional arch=all
Files:
e52721b89e042dc26e30a9d0bcfe0f2f 10186542 python-cooler_0.8.7.orig.tar.gz
6a3b006a5a74c750893392295077e7b3 4248 python-cooler_0.8.7-1.debian.tar.xz
lintian 2.79.0~bpo10+1 check for python-cooler_0.8.7-1.dsc (click to toggle)
README.source for python-cooler_0.8.7-1.dsc (click to toggle)
No README.source in this package
control file for python3-cooler_0.8.7-1_all.deb (click to toggle)
Package:python3-cooler
Source:python-cooler
Version:0.8.7-1
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:355
Depends:python3-asciitree, python3-biopython, python3-click, python3-cytoolz, python3-h5py, python3-multiprocess, python3-numpy, python3-pandas, python3-pyfaidx, python3-pysam, python3-scipy, python3-simplejson, python3-six, python3-yaml, python3:any, python3-pairix
Recommends:python3-dask
Section:python
Priority:optional
Homepage:https://github.com/mirnylab/cooler
Description:
library for a sparse, compressed, binary persistent storage
 Cooler is a support library for a sparse, compressed, binary persistent
 storage format, also called cooler, used to store genomic interaction
 data, such as Hi-C contact matrices.
 .
 The cooler file format is an implementation of a genomic matrix data
 model using HDF5 as the container format. The cooler package includes a
 suite of command line tools and a Python API to facilitate creating,
 querying and manipulating cooler files.
lintian 2.79.0~bpo10+1 check for python3-cooler_0.8.7-1_all.deb (click to toggle)
contents of python3-cooler_0.8.7-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2020-06-15 07:42 ./
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/bin/
-rwxr-xr-x root/root       377 2020-06-15 07:42 ./usr/bin/cooler
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/lib/
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/lib/python3/
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/lib/python3/dist-packages/cooler/
-rw-r--r-- root/root       627 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/__init__.py
-rw-r--r-- root/root        59 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/__main__.py
-rw-r--r-- root/root       399 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/_logging.py
-rw-r--r-- root/root        45 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/_version.py
-rw-r--r-- root/root     23976 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/api.py
-rw-r--r-- root/root     12650 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/balance.py
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/lib/python3/dist-packages/cooler/cli/
-rw-r--r-- root/root      3378 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/__init__.py
-rw-r--r-- root/root      6639 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/_util.py
-rw-r--r-- root/root      8159 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/balance.py
-rw-r--r-- root/root     14707 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/cload.py
-rw-r--r-- root/root      2519 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/coarsen.py
-rw-r--r-- root/root     12688 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/csort.py
-rw-r--r-- root/root      2131 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/digest.py
-rw-r--r-- root/root     13727 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/dump.py
-rw-r--r-- root/root      3399 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/fileops.py
-rw-r--r-- root/root      1442 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/info.py
-rw-r--r-- root/root     10090 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/load.py
-rw-r--r-- root/root      1660 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/makebins.py
-rw-r--r-- root/root      2032 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/merge.py
-rw-r--r-- root/root      8152 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/show.py
-rw-r--r-- root/root      5291 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/cli/zoomify.py
-rw-r--r-- root/root     17463 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/core.py
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/lib/python3/dist-packages/cooler/create/
-rw-r--r-- root/root       814 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/create/__init__.py
-rw-r--r-- root/root     32306 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/create/_create.py
-rw-r--r-- root/root     38953 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/create/_ingest.py
-rw-r--r-- root/root     13338 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/fileops.py
-rw-r--r-- root/root      1322 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/io.py
-rw-r--r-- root/root     25805 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/reduce.py
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/lib/python3/dist-packages/cooler/sandbox/
-rw-r--r-- root/root         0 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/sandbox/__init__.py
-rw-r--r-- root/root      3662 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/sandbox/dask.py
-rw-r--r-- root/root      8194 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/tools.py
-rw-r--r-- root/root     25978 2020-01-13 04:09 ./usr/lib/python3/dist-packages/cooler/util.py
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/lib/python3/dist-packages/cooler-0.8.7.egg-info/
-rw-r--r-- root/root      5492 2020-06-15 07:42 ./usr/lib/python3/dist-packages/cooler-0.8.7.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2020-06-15 07:42 ./usr/lib/python3/dist-packages/cooler-0.8.7.egg-info/dependency_links.txt
-rw-r--r-- root/root        43 2020-06-15 07:42 ./usr/lib/python3/dist-packages/cooler-0.8.7.egg-info/entry_points.txt
-rw-r--r-- root/root         1 2020-06-15 07:42 ./usr/lib/python3/dist-packages/cooler-0.8.7.egg-info/not-zip-safe
-rw-r--r-- root/root        43 2020-06-15 07:42 ./usr/lib/python3/dist-packages/cooler-0.8.7.egg-info/requires.txt
-rw-r--r-- root/root         7 2020-06-15 07:42 ./usr/lib/python3/dist-packages/cooler-0.8.7.egg-info/top_level.txt
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/share/
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/share/doc/python3-cooler/
-rw-r--r-- root/root       159 2020-06-15 07:42 ./usr/share/doc/python3-cooler/changelog.Debian.gz
-rw-r--r-- root/root      5820 2020-01-13 04:09 ./usr/share/doc/python3-cooler/changelog.gz
-rw-r--r-- root/root      1803 2020-06-15 07:42 ./usr/share/doc/python3-cooler/copyright
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/share/man/
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/share/man/man1/
-rw-r--r-- root/root      1050 2020-06-15 07:42 ./usr/share/man/man1/cooler.1.gz
control file for python3-cooler-examples_0.8.7-1_all.deb (click to toggle)
Package:python3-cooler-examples
Source:python-cooler
Version:0.8.7-1
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:7954
Enhances:python3-cooler
Section:python
Priority:optional
Homepage:https://github.com/mirnylab/cooler
Description:
library for a sparse, compressed, binary persistent storage (examples)
 Cooler is a support library for a sparse, compressed, binary persistent
 storage format, also called cooler, used to store genomic interaction
 data, such as Hi-C contact matrices.
 .
 The cooler file format is an implementation of a genomic matrix data
 model using HDF5 as the container format. The cooler package includes a
 suite of command line tools and a Python API to facilitate creating,
 querying and manipulating cooler files.
 .
 This package contains some example data.
lintian 2.79.0~bpo10+1 check for python3-cooler-examples_0.8.7-1_all.deb (click to toggle)
contents of python3-cooler-examples_0.8.7-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2020-06-15 07:42 ./
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/share/
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/share/doc/python3-cooler/
-rw-r--r-- root/root   8128328 2020-06-15 07:42 ./usr/share/doc/python3-cooler/tests.tar.xz
drwxr-xr-x root/root         0 2020-06-15 07:42 ./usr/share/doc/python3-cooler-examples/
-rw-r--r-- root/root       159 2020-06-15 07:42 ./usr/share/doc/python3-cooler-examples/changelog.Debian.gz
-rw-r--r-- root/root      5820 2020-01-13 04:09 ./usr/share/doc/python3-cooler-examples/changelog.gz
-rw-r--r-- root/root      1803 2020-06-15 07:42 ./usr/share/doc/python3-cooler-examples/copyright

Timestamp: 15.06.2020 / 09:01:12 (UTC)