Debian NEW package overview for pyensembl
pyensembl_1.9.1+ds-1_amd64.changes (click to toggle)
Format:1.8
Date:Fri, 21 May 2021 23:17:37 +0530
Source:pyensembl
Binary:pyensembl
Architecture:source all
Version:1.9.1+ds-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
pyensembl  - installs data from the Ensembl genome database
Closes:988822
Changes:
pyensembl (1.9.1+ds-1) unstable; urgency=medium

  [ Steffen Moeller, Nilesh Patra ]
  * Initial release (Closes: #988822)
Files:
b59ca1dce46bdcdb698d1d81e74c8972 2170 science optional pyensembl_1.9.1+ds-1.dsc
f08638e63d309dda2a6f312761775860 46996 science optional pyensembl_1.9.1+ds.orig.tar.xz
7051c6a006bc5605420382d3492858c8 3656 science optional pyensembl_1.9.1+ds-1.debian.tar.xz
0825d10c7cc1c2b716be6606e3fdfdd8 35336 science optional pyensembl_1.9.1+ds-1_all.deb
b11b1cf50da429e7bf9809668b99abfd 7700 science optional pyensembl_1.9.1+ds-1_amd64.buildinfo
pyensembl_1.9.1+ds-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:pyensembl
Binary:pyensembl
Architecture:all
Version:1.9.1+ds-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Steffen Moeller <moeller@debian.org>
Homepage:https://github.com/openvax/pyensembl
Standards-Version:4.5.1
Vcs-Browser:https://salsa.debian.org/med-team/pyensembl
Vcs-Git:https://salsa.debian.org/med-team/pyensembl.git
Testsuite:autopkgtest-pkg-python
Build-Depends:debhelper-compat (=13), dh-python, python3-setuptools, python3-all, python3-pandas, python3-numpy, python3-datacache, python3-serializable, python3-memoized-property, python3-gtfparse
Package-List:pyensembl deb science optional arch=all
Files:
f08638e63d309dda2a6f312761775860 46996 pyensembl_1.9.1+ds.orig.tar.xz
7051c6a006bc5605420382d3492858c8 3656 pyensembl_1.9.1+ds-1.debian.tar.xz
lintian 2.94.0~bpo10+1 check for pyensembl_1.9.1+ds-1.dsc (click to toggle)
README.source for pyensembl_1.9.1+ds-1.dsc (click to toggle)
No README.source in this package
control file for pyensembl_1.9.1+ds-1_all.deb (click to toggle)
Package:pyensembl
Version:1.9.1+ds-1
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:206
Depends:python3-datacache, python3-gtfparse, python3-memoized-property, python3-pandas, python3-serializable, python3-six (>=1.9.0), python3-typechecks, python3:any
Section:science
Priority:optional
Homepage:https://github.com/openvax/pyensembl
Description:
installs data from the Ensembl genome database
 The Ensembl genome database is an established reference
 for genomic sequences and their automated annotation.
 To have this data local has advantages for bulk analyses,
 e.g. for the mapping of reads from RNA-seq against the
 latest golden path - or a previous one to compare analyses.
 .
 This package provides a reproducible way to insatll this
 data and thus simplify the automation of respective
 workflows.
lintian 2.94.0~bpo10+1 check for pyensembl_1.9.1+ds-1_all.deb (click to toggle)
contents of pyensembl_1.9.1+ds-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2021-05-21 17:47 ./
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/bin/
-rwxr-xr-x root/root       968 2021-05-21 17:47 ./usr/bin/pyensembl
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/lib/
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/lib/python3/
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/lib/python3/dist-packages/pyensembl/
-rw-r--r-- root/root      1927 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/__init__.py
-rw-r--r-- root/root      2699 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/common.py
-rw-r--r-- root/root     22120 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/database.py
-rw-r--r-- root/root     12050 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/download_cache.py
-rw-r--r-- root/root      5224 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/ensembl_release.py
-rw-r--r-- root/root      1170 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/ensembl_release_versions.py
-rw-r--r-- root/root      5609 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/ensembl_url_templates.py
-rw-r--r-- root/root      2293 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/exon.py
-rw-r--r-- root/root      5434 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/fasta.py
-rw-r--r-- root/root      3410 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/gene.py
-rw-r--r-- root/root     40100 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/genome.py
-rw-r--r-- root/root      7789 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/locus.py
-rw-r--r-- root/root      2075 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/locus_with_genome.py
-rw-r--r-- root/root       722 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/logging.conf
-rw-r--r-- root/root      4631 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/memory_cache.py
-rw-r--r-- root/root      2043 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/normalization.py
-rw-r--r-- root/root      3104 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/reference_name.py
-rw-r--r-- root/root      1239 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/search.py
-rw-r--r-- root/root      5420 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/sequence_data.py
-rw-r--r-- root/root      9304 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/shell.py
-rw-r--r-- root/root      7524 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/species.py
-rw-r--r-- root/root     16784 2020-12-28 21:53 ./usr/lib/python3/dist-packages/pyensembl/transcript.py
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/lib/python3/dist-packages/pyensembl-1.9.1.egg-info/
-rw-r--r-- root/root      9594 2021-05-21 17:47 ./usr/lib/python3/dist-packages/pyensembl-1.9.1.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2021-05-21 17:47 ./usr/lib/python3/dist-packages/pyensembl-1.9.1.egg-info/dependency_links.txt
-rw-r--r-- root/root        51 2021-05-21 17:47 ./usr/lib/python3/dist-packages/pyensembl-1.9.1.egg-info/entry_points.txt
-rw-r--r-- root/root         0 2021-05-21 17:47 ./usr/lib/python3/dist-packages/pyensembl-1.9.1.egg-info/requires.txt
-rw-r--r-- root/root        10 2021-05-21 17:47 ./usr/lib/python3/dist-packages/pyensembl-1.9.1.egg-info/top_level.txt
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/share/
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/share/doc/
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/share/doc/pyensembl/
-rw-r--r-- root/root       181 2021-05-21 17:47 ./usr/share/doc/pyensembl/changelog.Debian.gz
-rw-r--r-- root/root      1108 2021-05-21 17:47 ./usr/share/doc/pyensembl/copyright
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/share/man/
drwxr-xr-x root/root         0 2021-05-21 17:47 ./usr/share/man/man1/
-rw-r--r-- root/root       634 2021-05-21 17:47 ./usr/share/man/man1/pyensembl.1.gz

Timestamp: 21.05.2021 / 19:00:59 (UTC)