corner image corner image corner image corner image Debian NEW package overview for pizzly
pizzly_0.37.3-1_amd64.changes (click to toggle)
Format:1.8
Date:Mon, 03 Jun 2019 18:28:44 +0200
Source:pizzly
Binary:pizzly pizzly-dbgsym
Architecture:source amd64
Version:0.37.3-1
Distribution:unstable
Urgency:medium
Maintainer:Steffen Moeller <moeller@debian.org>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
pizzly     - Identifies gene fusions in RNA sequencing data
Closes:929939
Changes:
pizzly (0.37.3-1) unstable; urgency=medium

  * Initial release (Closes: #929939)
Files:
b6c9d2f14f0dc5b812f51121b622dd83 1879 science optional pizzly_0.37.3-1.dsc
cba5c09c8f5493378b068821029df3a5 262304 science optional pizzly_0.37.3.orig.tar.xz
236258138da1ea4ebe89e4d17eb0a47a 2876 science optional pizzly_0.37.3-1.debian.tar.xz
60cced5a9d3191c921430924ffacbbc6 3782116 debug optional pizzly-dbgsym_0.37.3-1_amd64.deb
70094fc195fe8c3a5619df0f27bd880b 6897 science optional pizzly_0.37.3-1_amd64.buildinfo
8d6da0f75a5bdfdf4a991dd2f357523e 279832 science optional pizzly_0.37.3-1_amd64.deb
pizzly_0.37.3-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:pizzly
Binary:pizzly
Architecture:any
Version:0.37.3-1
Maintainer:Steffen Moeller <moeller@debian.org>
Homepage:https://github.com/pmelsted/pizzly
Standards-Version:4.3.0
Vcs-Browser:https://salsa.debian.org/debian/pizzly
Vcs-Git:https://salsa.debian.org/debian/pizzly.git
Build-Depends:debhelper (>=11), libseqan2-dev, help2man, cmake, zlib1g-dev
Package-List:pizzly deb science optional arch=any
Files:
cba5c09c8f5493378b068821029df3a5 262304 pizzly_0.37.3.orig.tar.xz
236258138da1ea4ebe89e4d17eb0a47a 2876 pizzly_0.37.3-1.debian.tar.xz
lintian 2.15.0~bpo9+1 check for pizzly_0.37.3-1.dsc (click to toggle)
README.source for pizzly_0.37.3-1.dsc (click to toggle)
The seqan directory was removed from the source tree,
substituted with a dependency to the libseqan2-dev package.
control file for pizzly_0.37.3-1_amd64.deb (click to toggle)
Package:pizzly
Version:0.37.3-1
Architecture:amd64
Maintainer:Steffen Moeller <moeller@debian.org>
Installed-Size:867
Depends:libc6 (>=2.14), libgcc1 (>=1:3.0), libstdc++6 (>=7), zlib1g (>=1:1.1.4), python3, kallisto
Section:science
Priority:optional
Homepage:https://github.com/pmelsted/pizzly
Description:
Identifies gene fusions in RNA sequencing data
 For the interpretation of the transcriptome (the abundance
 and sequence of RNA) of tomour cells one is particularly
 interested in transcripts that cannot be mapped to single
 genes but that are seen to be fused as parts from two genes.
 Likely eplanations are chromosomal translocations.
 .
 Pizzly can identify novel such peculiarities, building on
 interpretations on variable splicing by the tool kallisto.
 Both tools are elements of the bcbio workflow.
lintian 2.15.0~bpo9+1 check for pizzly_0.37.3-1_amd64.deb (click to toggle)
W: pizzly: script-with-language-extension usr/bin/flatten_json.py
W: pizzly: script-with-language-extension usr/bin/get_fragment_length.py
W: pizzly: binary-without-manpage usr/bin/flatten_json.py
W: pizzly: binary-without-manpage usr/bin/get_fragment_length.py
W: pizzly: binary-without-manpage usr/bin/pizzly_flatten_json.py
contents of pizzly_0.37.3-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2019-06-03 16:28 ./
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/bin/
-rwxr-xr-x root/root      1491 2019-06-03 16:28 ./usr/bin/flatten_json.py
-rwxr-xr-x root/root       908 2019-06-03 16:28 ./usr/bin/get_fragment_length.py
-rwxr-xr-x root/root    863624 2019-06-03 16:28 ./usr/bin/pizzly
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/share/
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/share/doc/pizzly/
-rw-r--r-- root/root       438 2019-06-03 16:28 ./usr/share/doc/pizzly/README.Debian
-rw-r--r-- root/root      4027 2019-06-03 16:28 ./usr/share/doc/pizzly/README.md
-rw-r--r-- root/root       114 2019-06-03 16:28 ./usr/share/doc/pizzly/README.source
-rw-r--r-- root/root       159 2019-06-03 16:28 ./usr/share/doc/pizzly/changelog.Debian.gz
-rw-r--r-- root/root      1622 2019-06-03 16:28 ./usr/share/doc/pizzly/copyright
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/share/man/
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/share/man/man1/
-rw-r--r-- root/root       701 2019-06-03 16:28 ./usr/share/man/man1/pizzly.1.gz
lrwxrwxrwx root/root         0 2019-06-03 16:28 ./usr/bin/pizzly_flatten_json.py -> flatten_json.py
control file for pizzly-dbgsym_0.37.3-1_amd64.deb (click to toggle)
Package:pizzly-dbgsym
Source:pizzly
Version:0.37.3-1
Auto-Built-Package:debug-symbols
Architecture:amd64
Maintainer:Steffen Moeller <moeller@debian.org>
Installed-Size:3902
Depends:pizzly (=0.37.3-1)
Section:debug
Priority:optional
Description:
debug symbols for pizzly
Build-Ids:6a7e8a07e3124e451b8ae868b0f10966095e64b0
lintian 2.15.0~bpo9+1 check for pizzly-dbgsym_0.37.3-1_amd64.deb (click to toggle)
contents of pizzly-dbgsym_0.37.3-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2019-06-03 16:28 ./
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/lib/
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/lib/debug/
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/lib/debug/.build-id/6a/
-rw-r--r-- root/root   3985344 2019-06-03 16:28 ./usr/lib/debug/.build-id/6a/7e8a07e3124e451b8ae868b0f10966095e64b0.debug
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/share/
drwxr-xr-x root/root         0 2019-06-03 16:28 ./usr/share/doc/
lrwxrwxrwx root/root         0 2019-06-03 16:28 ./usr/share/doc/pizzly-dbgsym -> pizzly

Timestamp: 04.06.2019 / 16:01:13 (UTC)