Debian NEW package overview for pbbam
| pbbam_2.1.0+dfsg-1_amd64.changes (click to toggle) | |
|---|---|
| Format: | 1.8 |
| Date: | Fri, 29 Jul 2022 11:36:48 +0200 |
| Source: | pbbam |
| Binary: | libpbbam-dev libpbbam2.1.0 libpbbam2.1.0-dbgsym pbbamtools pbbamtools-dbgsym |
| Architecture: | source amd64 |
| Version: | 2.1.0+dfsg-1 |
| Distribution: | unstable |
| Urgency: | medium |
| Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| Changed-By: | Andreas Tille <tille@debian.org> |
| Description: | libpbbam-dev - Pacific Biosciences binary alignment/map (BAM) library (headers) libpbbam2.1.0 - Pacific Biosciences binary alignment/map (BAM) library pbbamtools - processing Pacific Biosciences binary alignment/map files |
| Changes: | pbbam (2.1.0+dfsg-1) unstable; urgency=medium * New upstream version * Standards-Version: 4.6.1 (routine-update) * Drop unnecessary dependency on build-essential. * Bump SONAME to 2.1.0 |
| Files: | b89767023831914077db17c4d6355a90 2321 science optional pbbam_2.1.0+dfsg-1.dsc 5a5314ba5114fb1ec18d98bbc5513cfc 7823140 science optional pbbam_2.1.0+dfsg.orig.tar.xz 15cb0f7b11a721a72bf880ec48c06c87 8520 science optional pbbam_2.1.0+dfsg-1.debian.tar.xz e4c8221910bcb957a410e7d17833e7fe 88760 libdevel optional libpbbam-dev_2.1.0+dfsg-1_amd64.deb 4607a62bc1b529d3966c5e940c868ca5 17388028 debug optional libpbbam2.1.0-dbgsym_2.1.0+dfsg-1_amd64.deb 111b2df45e07d075da8c8f7c6b5ce7a0 762304 libs optional libpbbam2.1.0_2.1.0+dfsg-1_amd64.deb 1931d876a6b2c61686b8082dd7333c87 9412 science optional pbbam_2.1.0+dfsg-1_amd64.buildinfo bad5df8d2afb5739eb7108ee47239c70 2757644 debug optional pbbamtools-dbgsym_2.1.0+dfsg-1_amd64.deb 8f89a627e6483a5f4888ce2857c91e14 126296 science optional pbbamtools_2.1.0+dfsg-1_amd64.deb |
| control file for libpbbam2.1.0_2.1.0+dfsg-1_amd64.deb (click to toggle) | |
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| Package: | libpbbam2.1.0 |
| Source: | pbbam |
| Version: | 2.1.0+dfsg-1 |
| Architecture: | amd64 |
| Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| Installed-Size: | 2814 |
| Depends: | libc6 (>=2.33), libgcc-s1 (>=3.0), libhts3 (>=1.10), libpbcopper2.0.0 (>=2.0.0+dfsg), libstdc++6 (>=11), zlib1g (>=1:1.2.3.3) |
| Breaks: | libpbbam (<< 2.1.0+dfsg-1) |
| Section: | libs |
| Priority: | optional |
| Multi-Arch: | same |
| Homepage: | https://pbbam.readthedocs.org/en/latest/index.html |
| Description: | Pacific Biosciences binary alignment/map (BAM) library The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group. . PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information. The pbbam library provides tools to work with these files |
| contents of libpbbam2.1.0_2.1.0+dfsg-1_amd64.deb (click to toggle) | |
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drwxr-xr-x root/root 0 2022-07-29 09:36 ./ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/x86_64-linux-gnu/ -rw-r--r-- root/root 2852920 2022-07-29 09:36 ./usr/lib/x86_64-linux-gnu/libpbbam.so.2.1.0 drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/share/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/share/doc/libpbbam2.1.0/ -rw-r--r-- root/root 2610 2022-07-29 09:36 ./usr/share/doc/libpbbam2.1.0/changelog.Debian.gz -rw-r--r-- root/root 9346 2022-04-19 10:25 ./usr/share/doc/libpbbam2.1.0/changelog.gz -rw-r--r-- root/root 3463 2022-07-29 09:36 ./usr/share/doc/libpbbam2.1.0/copyright | |
| copyright of libpbbam2.1.0_2.1.0+dfsg-1_amd64.deb (click to toggle) | |
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Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: pbbam
Upstream-Contact: Pacific Biosciences <devnet@pacificbiosciences.com>
Source: https://github.com/PacificBiosciences/pbbam
Files-Excluded: third-party
*/clang-format*
*/tests/scripts/cram*
Files: *
Copyright: 2014-2019 Pacific Biosciences of California, Inc. <devnet@pacificbiosciences.com>
License: PacBio-BSD-3-Clause
Files: src/pugixml/*
Copyright: 2006-2014 Arseny Kapoulkine <arseny.kapoulkine@gmail.com>
2003 Kristen Wegner <kristen@tima.net>
License: MIT
Files: debian/*
Copyright: 2015-2016 Afif Elghraoui <afif@debian.org>
2016-2019 Andreas Tille <tille@debian.org>
License: PacBio-BSD-3-Clause
License: PacBio-BSD-3-Clause
Redistribution and use in source and binary forms, with or without
modification, are permitted (subject to the limitations in the
disclaimer below) provided that the following conditions are met:
1. Redistributions of source code must retain the above copyright
notice, this list of conditions and the following disclaimer.
2. Redistributions in binary form must reproduce the above
copyright notice, this list of conditions and the following
disclaimer in the documentation and/or other materials provided
with the distribution.
3. Neither the name of Pacific Biosciences nor the names of its
contributors may be used to endorse or promote products derived
from this software without specific prior written permission.
.
NO EXPRESS OR IMPLIED LICENSES TO ANY PARTY'S PATENT RIGHTS ARE
GRANTED BY THIS LICENSE. THIS SOFTWARE IS PROVIDED BY PACIFIC
BIOSCIENCES AND ITS CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED
WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES
OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL PACIFIC BIOSCIENCES OR ITS
CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF
USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT
OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
SUCH DAMAGE.
License: MIT
Permission is hereby granted, free of charge, to any person
obtaining a copy of this software and associated documentation
files (the "Software"), to deal in the Software without
restriction, including without limitation the rights to use,
copy, modify, merge, publish, distribute, sublicense, and/or sell
copies of the Software, and to permit persons to whom the
Software is furnished to do so, subject to the following
conditions:
.
The above copyright notice and this permission notice shall be
included in all copies or substantial portions of the Software.
.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
OTHER DEALINGS IN THE SOFTWARE.
| |
| control file for libpbbam2.1.0-dbgsym_2.1.0+dfsg-1_amd64.deb (click to toggle) | |
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| Package: | libpbbam2.1.0-dbgsym |
| Source: | pbbam |
| Version: | 2.1.0+dfsg-1 |
| Auto-Built-Package: | debug-symbols |
| Architecture: | amd64 |
| Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| Installed-Size: | 17705 |
| Depends: | libpbbam2.1.0 (=2.1.0+dfsg-1) |
| Section: | debug |
| Priority: | optional |
| Multi-Arch: | same |
| Description: | debug symbols for libpbbam2.1.0 |
| Build-Ids: | 003fb889add82064e72f3fa396157683694a6d36 |
| contents of libpbbam2.1.0-dbgsym_2.1.0+dfsg-1_amd64.deb (click to toggle) | |
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drwxr-xr-x root/root 0 2022-07-29 09:36 ./ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/.build-id/00/ -rw-r--r-- root/root 18118672 2022-07-29 09:36 ./usr/lib/debug/.build-id/00/3fb889add82064e72f3fa396157683694a6d36.debug drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/share/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-07-29 09:36 ./usr/share/doc/libpbbam2.1.0-dbgsym -> libpbbam2.1.0 | |
| copyright of libpbbam2.1.0-dbgsym_2.1.0+dfsg-1_amd64.deb (click to toggle) | |
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WARNING: No copyright found, please check package manually. | |
| control file for pbbamtools-dbgsym_2.1.0+dfsg-1_amd64.deb (click to toggle) | |
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| Package: | pbbamtools-dbgsym |
| Source: | pbbam |
| Version: | 2.1.0+dfsg-1 |
| Auto-Built-Package: | debug-symbols |
| Architecture: | amd64 |
| Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| Installed-Size: | 2829 |
| Depends: | pbbamtools (=2.1.0+dfsg-1) |
| Section: | debug |
| Priority: | optional |
| Description: | debug symbols for pbbamtools |
| Build-Ids: | 4fd998a69d1679c6b325be9d8a72e0bc60eb73c5 84e865a80fd6c1120fcacd49717a4dac73573664 d498cde019351fc2605daac6632734b0a5683f0e df7379860740e27552f5e6d9b50940f6652f194f e8c0004606819d0386df78d5a4fdd84bfa0831c4 f8dabd903b1667164c03cb2618998a2b706f98b0 |
| contents of pbbamtools-dbgsym_2.1.0+dfsg-1_amd64.deb (click to toggle) | |
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drwxr-xr-x root/root 0 2022-07-29 09:36 ./ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/.build-id/4f/ -rw-r--r-- root/root 135688 2022-07-29 09:36 ./usr/lib/debug/.build-id/4f/d998a69d1679c6b325be9d8a72e0bc60eb73c5.debug drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/.build-id/84/ -rw-r--r-- root/root 679592 2022-07-29 09:36 ./usr/lib/debug/.build-id/84/e865a80fd6c1120fcacd49717a4dac73573664.debug drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/.build-id/d4/ -rw-r--r-- root/root 218992 2022-07-29 09:36 ./usr/lib/debug/.build-id/d4/98cde019351fc2605daac6632734b0a5683f0e.debug drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/.build-id/df/ -rw-r--r-- root/root 158952 2022-07-29 09:36 ./usr/lib/debug/.build-id/df/7379860740e27552f5e6d9b50940f6652f194f.debug drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/.build-id/e8/ -rw-r--r-- root/root 643944 2022-07-29 09:36 ./usr/lib/debug/.build-id/e8/c0004606819d0386df78d5a4fdd84bfa0831c4.debug drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/.build-id/f8/ -rw-r--r-- root/root 806368 2022-07-29 09:36 ./usr/lib/debug/.build-id/f8/dabd903b1667164c03cb2618998a2b706f98b0.debug drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/lib/debug/.dwz/x86_64-linux-gnu/ -rw-r--r-- root/root 232960 2022-07-29 09:36 ./usr/lib/debug/.dwz/x86_64-linux-gnu/pbbamtools.debug drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/share/ drwxr-xr-x root/root 0 2022-07-29 09:36 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-07-29 09:36 ./usr/share/doc/pbbamtools-dbgsym -> pbbamtools | |
| copyright of pbbamtools-dbgsym_2.1.0+dfsg-1_amd64.deb (click to toggle) | |
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WARNING: No copyright found, please check package manually. | |
Timestamp: 29.07.2022 / 11:01:17 (UTC)