nxtrim_0.4.3+dfsg-1_amd64.changes (click to toggle) | |
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Format: | 1.8 |
Date: | Mon, 05 Apr 2021 19:22:42 +0530 |
Source: | nxtrim |
Binary: | nxtrim nxtrim-dbgsym |
Architecture: | source amd64 |
Version: | 0.4.3+dfsg-1 |
Distribution: | unstable |
Urgency: | medium |
Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
Changed-By: | Nilesh Patra <nilesh@debian.org> |
Description: | nxtrim - Optimized trimming of Illumina mate pair reads |
Closes: | 986421 |
Changes: | nxtrim (0.4.3+dfsg-1) unstable; urgency=medium * Initial release (Closes: #986421) |
Files: | d17988f62afbd4c5682c4b2c3e6b5bf7 1987 science optional nxtrim_0.4.3+dfsg-1.dsc be88d0019dd82dc1696dfd2d6c185c47 65903 science optional nxtrim_0.4.3+dfsg.orig.tar.gz bf47fdb286f5798b35cc9d358fa005c6 4856 science optional nxtrim_0.4.3+dfsg-1.debian.tar.xz ed93efbbe627be4216bf6b0102be9c98 319772 debug optional nxtrim-dbgsym_0.4.3+dfsg-1_amd64.deb 3e9749ac598ad990fbb8b9c922f2ef99 5996 science optional nxtrim_0.4.3+dfsg-1_amd64.buildinfo e1f022369ccc8c85924445ca4fcc71e9 35356 science optional nxtrim_0.4.3+dfsg-1_amd64.deb |
nxtrim_0.4.3+dfsg-1.dsc (click to toggle) | |
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Format: | 3.0 (quilt) |
Source: | nxtrim |
Binary: | nxtrim |
Architecture: | any |
Version: | 0.4.3+dfsg-1 |
Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
Uploaders: | Nilesh Patra <nilesh@debian.org> |
Homepage: | https://github.com/sequencing/NxTrim |
Standards-Version: | 4.5.1 |
Vcs-Browser: | https://salsa.debian.org/med-team/nxtrim |
Vcs-Git: | https://salsa.debian.org/med-team/nxtrim.git |
Testsuite: | autopkgtest |
Build-Depends: | debhelper-compat (=13), zlib1g-dev |
Package-List: | nxtrim deb science optional arch=any |
Files: | be88d0019dd82dc1696dfd2d6c185c47 65903 nxtrim_0.4.3+dfsg.orig.tar.gz bf47fdb286f5798b35cc9d358fa005c6 4856 nxtrim_0.4.3+dfsg-1.debian.tar.xz |
control file for nxtrim_0.4.3+dfsg-1_amd64.deb (click to toggle) | |
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Package: | nxtrim |
Version: | 0.4.3+dfsg-1 |
Architecture: | amd64 |
Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
Installed-Size: | 105 |
Depends: | libc6 (>=2.14), libgcc-s1 (>=3.0), libstdc++6 (>=5.2), zlib1g (>=1:1.1.4), python3 |
Section: | science |
Priority: | optional |
Homepage: | https://github.com/sequencing/NxTrim |
Description: | Optimized trimming of Illumina mate pair reads This package helps rmove Nextera Mate Pair junction adapters and categorise reads according to the orientation implied by the adapter location. |
contents of nxtrim_0.4.3+dfsg-1_amd64.deb (click to toggle) | |
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drwxr-xr-x root/root 0 2021-04-05 13:52 ./ drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/ drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/bin/ -rwxr-xr-x root/root 84784 2021-04-05 13:52 ./usr/bin/nxtrim drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/share/ drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/share/doc/nxtrim/ -rw-r--r-- root/root 1575 2018-02-09 13:10 ./usr/share/doc/nxtrim/adapter_matching.md -rw-r--r-- root/root 159 2021-04-05 13:52 ./usr/share/doc/nxtrim/changelog.Debian.gz -rw-r--r-- root/root 1142 2018-02-09 13:10 ./usr/share/doc/nxtrim/changelog.gz -rw-r--r-- root/root 2749 2021-04-05 13:52 ./usr/share/doc/nxtrim/copyright drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/share/man/ drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/share/man/man1/ -rw-r--r-- root/root 1031 2021-04-05 13:52 ./usr/share/man/man1/nxtrim.1.gz drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/share/nxtrim/ -rwxr-xr-x root/root 1961 2021-04-05 13:52 ./usr/share/nxtrim/count_orientation.py |
copyright of nxtrim_0.4.3+dfsg-1_amd64.deb (click to toggle) | |
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Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: nxtrim Source: https://github.com/sequencing/NxTrim/releases Files-Excluded: googletest Files: * Copyright: 2014-2018 Illumina, Inc. License: BSD-2-Clause Files: kseq.h Copyright: 2008 Genome Research Ltd License: MIT Files: debian/* Copyright: 2020 Nilesh Patra <nilesh@debian.org> License: BSD-2-Clause License: BSD-2-Clause Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: . Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. . Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. . THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. License: MIT Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: . The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. . THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. |
control file for nxtrim-dbgsym_0.4.3+dfsg-1_amd64.deb (click to toggle) | |
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Package: | nxtrim-dbgsym |
Source: | nxtrim |
Version: | 0.4.3+dfsg-1 |
Auto-Built-Package: | debug-symbols |
Architecture: | amd64 |
Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
Installed-Size: | 347 |
Depends: | nxtrim (=0.4.3+dfsg-1) |
Section: | debug |
Priority: | optional |
Description: | debug symbols for nxtrim |
Build-Ids: | bf89f6656efab4319d1787089b58b34775bb4dfe |
contents of nxtrim-dbgsym_0.4.3+dfsg-1_amd64.deb (click to toggle) | |
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drwxr-xr-x root/root 0 2021-04-05 13:52 ./ drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/ drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/lib/ drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/lib/debug/ drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/lib/debug/.build-id/bf/ -rw-r--r-- root/root 344416 2021-04-05 13:52 ./usr/lib/debug/.build-id/bf/89f6656efab4319d1787089b58b34775bb4dfe.debug drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/share/ drwxr-xr-x root/root 0 2021-04-05 13:52 ./usr/share/doc/ lrwxrwxrwx root/root 0 2021-04-05 13:52 ./usr/share/doc/nxtrim-dbgsym -> nxtrim |
copyright of nxtrim-dbgsym_0.4.3+dfsg-1_amd64.deb (click to toggle) | |
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WARNING: No copyright found, please check package manually. |
Timestamp: 05.04.2021 / 19:00:56 (UTC)