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nanook_1.26+dfsg-1_amd64.changes (click to toggle)
Format:1.8
Date:Thu, 16 Nov 2017 12:02:19 +0100
Source:nanook
Binary:nanook
Architecture:source all
Version:1.26+dfsg-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Andreas Tille <tille@debian.org>
Description:
nanook     - pre- and post-alignment analysis of nanopore sequencing data
Closes:873983
Changes:
nanook (1.26+dfsg-1) unstable; urgency=medium

  * Initial release (Closes: #873983)
Files:
5cf0b657ab655b7dac620f78de5b8bc6 2019 science optional nanook_1.26+dfsg-1.dsc
1fc093b04472b05c7dfd849b6c4f7b86 79460 science optional nanook_1.26+dfsg.orig.tar.xz
a87f52811e0012d8f96200567ec604c8 3992 science optional nanook_1.26+dfsg-1.debian.tar.xz
4c2546f4f0b1d96bf034c89b8a6a083a 187620 science optional nanook_1.26+dfsg-1_all.deb
52047763d1e423ed68d499446394af44 11402 science optional nanook_1.26+dfsg-1_amd64.buildinfo
nanook_1.26+dfsg-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:nanook
Binary:nanook
Architecture:all
Version:1.26+dfsg-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Andreas Tille <tille@debian.org>
Homepage:https://documentation.tgac.ac.uk/display/NANOOK/NanoOK
Standards-Version:4.1.0
Vcs-Browser:https://anonscm.debian.org/cgit/debian-med/nanook.git
Vcs-Git:https://anonscm.debian.org/git/debian-med/nanook.git
Build-Depends:debhelper (>=10), default-jdk, javahelper, libcommons-io-java
Package-List:nanook deb science optional arch=all
Files:
1fc093b04472b05c7dfd849b6c4f7b86 79460 nanook_1.26+dfsg.orig.tar.xz
a87f52811e0012d8f96200567ec604c8 3992 nanook_1.26+dfsg-1.debian.tar.xz
lintian check for nanook_1.26+dfsg-1.dsc (click to toggle)
W: nanook source: missing-field-in-dep5-copyright license (paragraph at line 12)
W: nanook source: missing-field-in-dep5-copyright copyright (paragraph at line 12)
W: nanook source: newer-standards-version 4.1.0 (current is 3.9.8)
README.source for nanook_1.26+dfsg-1.dsc (click to toggle)
No README.source in this package
control file for nanook_1.26+dfsg-1_all.deb (click to toggle)
Package:nanook
Version:1.26+dfsg-1
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:276
Depends:libcommons-io-java, default-jre-headless, r-cran-ggplot2, r-cran-scales, r-cran-gridextra, r-cran-reshape, texlive-latex-base, hdf5-tools, last-align
Recommends:blasr, bwa
Suggests:default-jre
Section:science
Priority:optional
Homepage:https://documentation.tgac.ac.uk/display/NANOOK/NanoOK
Description:
pre- and post-alignment analysis of nanopore sequencing data
 NanoOK is a flexible, multi-reference software for pre- and post-
 alignment analysis of nanopore sequencing data, quality and error
 profiles.
 .
 NanoOK (pronounced na-nook) is a tool for extraction, alignment and
 analysis of Nanopore reads. NanoOK will extract reads as FASTA or FASTQ
 files, align them (with a choice of alignment tools), then generate a
 comprehensive multi-page PDF report containing yield, accuracy and
 quality analysis. Along the way, it generates plain text files which can
 be used for further analysis, as well as graphs suitable for inclusion
 in presentations and papers.
lintian check for nanook_1.26+dfsg-1_all.deb (click to toggle)
contents of nanook_1.26+dfsg-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2017-11-16 11:02 ./
drwxr-xr-x root/root         0 2017-11-16 11:02 ./usr/
drwxr-xr-x root/root         0 2017-11-16 11:02 ./usr/bin/
drwxr-xr-x root/root         0 2017-11-16 11:02 ./usr/share/
drwxr-xr-x root/root         0 2017-11-16 11:02 ./usr/share/doc/
drwxr-xr-x root/root         0 2017-11-16 11:02 ./usr/share/doc/nanook/
-rw-r--r-- root/root       159 2017-11-16 11:02 ./usr/share/doc/nanook/changelog.Debian.gz
-rw-r--r-- root/root      1426 2017-11-16 11:02 ./usr/share/doc/nanook/copyright
drwxr-xr-x root/root         0 2017-11-16 11:02 ./usr/share/java/
-rw-r--r-- root/root    179080 2017-11-16 11:02 ./usr/share/java/nanook-1.26.jar
drwxr-xr-x root/root         0 2017-11-16 11:02 ./usr/share/man/
drwxr-xr-x root/root         0 2017-11-16 11:02 ./usr/share/man/man1/
-rw-r--r-- root/root      1310 2017-11-16 11:02 ./usr/share/man/man1/nanook.1.gz
drwxr-xr-x root/root         0 2017-11-16 11:02 ./usr/share/nanook/
drwxr-xr-x root/root         0 2017-11-16 11:02 ./usr/share/nanook/bin/
-rwxr-xr-x root/root      6262 2017-06-19 15:38 ./usr/share/nanook/bin/get_contig_stats.pl
-rwxr-xr-x root/root       649 2017-11-16 11:02 ./usr/share/nanook/bin/nanook
-rwxr-xr-x root/root      3115 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_get_read_stats.pl
-rwxr-xr-x root/root      4354 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_get_tracking.pl
-rw-r--r-- root/root      4739 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_plot_comparison.R
-rw-r--r-- root/root      9482 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_plot_comparison_reference.R
-rw-r--r-- root/root      4703 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_plot_lengths.R
-rw-r--r-- root/root     40995 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_plot_reference.R
-rwxr-xr-x root/root      1865 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_split_fasta
-rwxr-xr-x root/root      1919 2017-06-19 15:38 ./usr/share/nanook/bin/slurmit
lrwxrwxrwx root/root         0 2017-11-16 11:02 ./usr/bin/nanook -> ../share/nanook/bin/nanook
lrwxrwxrwx root/root         0 2017-11-16 11:02 ./usr/share/java/nanook.jar -> nanook-1.26.jar

Timestamp: 16.11.2017 / 12:01:15 (UTC)