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nanook_1.26+dfsg-1_amd64.changes (click to toggle)
Format:1.8
Date:Sat, 02 Sep 2017 15:36:27 +0200
Source:nanook
Binary:nanook
Architecture:source all
Version:1.26+dfsg-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Andreas Tille <tille@debian.org>
Description:
nanook     - pre- and post-alignment analysis of nanopore sequencing data
Closes:873983
Changes:
nanook (1.26+dfsg-1) unstable; urgency=medium

  * Initial release (Closes: #873983)
Files:
4e42217a1edc1c9f13d2214cedf2d11d 2019 science optional nanook_1.26+dfsg-1.dsc
1fc093b04472b05c7dfd849b6c4f7b86 79460 science optional nanook_1.26+dfsg.orig.tar.xz
853f28a83a11d90dcdaaf6fcbff38f6c 3812 science optional nanook_1.26+dfsg-1.debian.tar.xz
f37b18bcb7e3c9150a0cac5243689351 187348 science optional nanook_1.26+dfsg-1_all.deb
b42d02a9170ef9b3dd583868666a98b8 10409 science optional nanook_1.26+dfsg-1_amd64.buildinfo
nanook_1.26+dfsg-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:nanook
Binary:nanook
Architecture:all
Version:1.26+dfsg-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Andreas Tille <tille@debian.org>
Homepage:https://documentation.tgac.ac.uk/display/NANOOK/NanoOK
Standards-Version:4.1.0
Vcs-Browser:https://anonscm.debian.org/cgit/debian-med/nanook.git
Vcs-Git:https://anonscm.debian.org/git/debian-med/nanook.git
Build-Depends:debhelper (>=10), default-jdk, javahelper, libcommons-io-java
Package-List:nanook deb science optional arch=all
Files:
1fc093b04472b05c7dfd849b6c4f7b86 79460 nanook_1.26+dfsg.orig.tar.xz
853f28a83a11d90dcdaaf6fcbff38f6c 3812 nanook_1.26+dfsg-1.debian.tar.xz
lintian check for nanook_1.26+dfsg-1.dsc (click to toggle)
W: nanook source: newer-standards-version 4.1.0 (current is 3.9.8)
README.source for nanook_1.26+dfsg-1.dsc (click to toggle)
No README.source in this package
control file for nanook_1.26+dfsg-1_all.deb (click to toggle)
Package:nanook
Version:1.26+dfsg-1
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:276
Depends:libcommons-io-java, default-jre-headless, r-cran-ggplot2, r-cran-scales, r-cran-gridextra, r-cran-reshape, texlive-latex-base, hdf5-tools, last-align
Recommends:blasr, bwa
Suggests:default-jre
Section:science
Priority:optional
Homepage:https://documentation.tgac.ac.uk/display/NANOOK/NanoOK
Description:
pre- and post-alignment analysis of nanopore sequencing data
 NanoOK is a flexible, multi-reference software for pre- and post-
 alignment analysis of nanopore sequencing data, quality and error
 profiles.
 .
 NanoOK (pronounced na-nook) is a tool for extraction, alignment and
 analysis of Nanopore reads. NanoOK will extract reads as FASTA or FASTQ
 files, align them (with a choice of alignment tools), then generate a
 comprehensive multi-page PDF report containing yield, accuracy and
 quality analysis. Along the way, it generates plain text files which can
 be used for further analysis, as well as graphs suitable for inclusion
 in presentations and papers.
lintian check for nanook_1.26+dfsg-1_all.deb (click to toggle)
contents of nanook_1.26+dfsg-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2017-09-02 13:36 ./
drwxr-xr-x root/root         0 2017-09-02 13:36 ./usr/
drwxr-xr-x root/root         0 2017-09-02 13:36 ./usr/bin/
drwxr-xr-x root/root         0 2017-09-02 13:36 ./usr/share/
drwxr-xr-x root/root         0 2017-09-02 13:36 ./usr/share/doc/
drwxr-xr-x root/root         0 2017-09-02 13:36 ./usr/share/doc/nanook/
-rw-r--r-- root/root       158 2017-09-02 13:36 ./usr/share/doc/nanook/changelog.Debian.gz
-rw-r--r-- root/root      1041 2017-09-02 13:36 ./usr/share/doc/nanook/copyright
drwxr-xr-x root/root         0 2017-09-02 13:36 ./usr/share/java/
-rw-r--r-- root/root    179080 2017-09-02 13:36 ./usr/share/java/nanook-1.26.jar
drwxr-xr-x root/root         0 2017-09-02 13:36 ./usr/share/man/
drwxr-xr-x root/root         0 2017-09-02 13:36 ./usr/share/man/man1/
-rw-r--r-- root/root      1310 2017-09-02 13:36 ./usr/share/man/man1/nanook.1.gz
drwxr-xr-x root/root         0 2017-09-02 13:36 ./usr/share/nanook/
drwxr-xr-x root/root         0 2017-09-02 13:36 ./usr/share/nanook/bin/
-rwxr-xr-x root/root      6262 2017-06-19 15:38 ./usr/share/nanook/bin/get_contig_stats.pl
-rwxr-xr-x root/root       649 2017-09-02 13:36 ./usr/share/nanook/bin/nanook
-rwxr-xr-x root/root      3115 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_get_read_stats.pl
-rwxr-xr-x root/root      4354 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_get_tracking.pl
-rw-r--r-- root/root      4739 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_plot_comparison.R
-rw-r--r-- root/root      9482 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_plot_comparison_reference.R
-rw-r--r-- root/root      4703 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_plot_lengths.R
-rw-r--r-- root/root     40995 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_plot_reference.R
-rwxr-xr-x root/root      1865 2017-06-19 15:38 ./usr/share/nanook/bin/nanook_split_fasta
-rwxr-xr-x root/root      1919 2017-06-19 15:38 ./usr/share/nanook/bin/slurmit
lrwxrwxrwx root/root         0 2017-09-02 13:36 ./usr/bin/nanook -> ../share/nanook/bin/nanook
lrwxrwxrwx root/root         0 2017-09-02 13:36 ./usr/share/java/nanook.jar -> nanook-1.26.jar

Timestamp: 02.09.2017 / 16:01:05 (UTC)