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nanolyse_1.1.1-1_amd64.changes (click to toggle)
Format:1.8
Date:Wed, 24 Jun 2020 18:21:30 +0200
Source:nanolyse
Binary:nanolyse
Architecture:source amd64
Version:1.1.1-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Andreas Tille <tille@debian.org>
Description:
nanolyse   - remove lambda phage reads from a fastq file
Closes:963620
Changes:
nanolyse (1.1.1-1) unstable; urgency=medium

  * Initial release (Closes: #963620)
Files:
5e1b44b3d1e860619913a81b893d2e27 1999 science optional nanolyse_1.1.1-1.dsc
83c82daccf7dc3ca59300c0a136a7616 33529 science optional nanolyse_1.1.1.orig.tar.gz
0a750a46fb04a539792b3fcf9d1f230d 4488 science optional nanolyse_1.1.1-1.debian.tar.xz
d89d39368db7d1c5791d879762c3a252 5846 science optional nanolyse_1.1.1-1_amd64.buildinfo
5f5550ecef5a8201b14fd2b502a7a0e8 24240 science optional nanolyse_1.1.1-1_amd64.deb
nanolyse_1.1.1-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:nanolyse
Binary:nanolyse
Architecture:any
Version:1.1.1-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Andreas Tille <tille@debian.org>
Homepage:https://github.com/wdecoster/nanolyse
Standards-Version:4.5.0
Vcs-Browser:https://salsa.debian.org/med-team/nanolyse
Vcs-Git:https://salsa.debian.org/med-team/nanolyse.git
Testsuite:autopkgtest
Build-Depends:debhelper-compat (=13), dh-python, python3, python3-setuptools
Package-List:nanolyse deb science optional arch=any
Files:
83c82daccf7dc3ca59300c0a136a7616 33529 nanolyse_1.1.1.orig.tar.gz
0a750a46fb04a539792b3fcf9d1f230d 4488 nanolyse_1.1.1-1.debian.tar.xz
lintian 2.79.0~bpo10+1 check for nanolyse_1.1.1-1.dsc (click to toggle)
README.source for nanolyse_1.1.1-1.dsc (click to toggle)
No README.source in this package
control file for nanolyse_1.1.1-1_amd64.deb (click to toggle)
Package:nanolyse
Version:1.1.1-1
Architecture:amd64
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:65
Depends:python3-biopython, python3:any, python3-mappy
Section:science
Priority:optional
Homepage:https://github.com/wdecoster/nanolyse
Description:
remove lambda phage reads from a fastq file
 NanoLyse is a tool for rapid removal of contaminant DNA, using the
 Minimap2 aligner through the mappy Python binding. A typical application
 would be the removal of the lambda phage control DNA fragment supplied
 by ONT, for which the reference sequence is included in the package.
 However, this approach may lead to unwanted loss of reads from regions
 highly homologous to the lambda phage genome.
lintian 2.79.0~bpo10+1 check for nanolyse_1.1.1-1_amd64.deb (click to toggle)
contents of nanolyse_1.1.1-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2020-06-24 16:21 ./
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/bin/
-rwxr-xr-x root/root       387 2020-06-24 16:21 ./usr/bin/NanoLyse
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/lib/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/lib/python3/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/
-rw-r--r-- root/root      3551 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/dependency_links.txt
-rw-r--r-- root/root        53 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/entry_points.txt
-rw-r--r-- root/root        11 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/requires.txt
-rw-r--r-- root/root        19 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/top_level.txt
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/lib/python3/dist-packages/nanolyse/
-rw-r--r-- root/root      4124 2020-06-24 16:21 ./usr/lib/python3/dist-packages/nanolyse/NanoLyse.py
-rw-r--r-- root/root        33 2020-05-14 10:07 ./usr/lib/python3/dist-packages/nanolyse/__init__.py
-rw-r--r-- root/root        22 2020-05-14 10:07 ./usr/lib/python3/dist-packages/nanolyse/version.py
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/doc/nanolyse/
-rw-r--r-- root/root       278 2020-06-24 16:21 ./usr/share/doc/nanolyse/README.test
-rw-r--r-- root/root       154 2020-06-24 16:21 ./usr/share/doc/nanolyse/changelog.Debian.gz
-rw-r--r-- root/root       933 2020-06-24 16:21 ./usr/share/doc/nanolyse/copyright
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/doc/nanolyse/examples/
-rw-r--r-- root/root       258 2020-06-24 16:21 ./usr/share/doc/nanolyse/examples/README
-rw-r--r-- root/root      1463 2020-06-24 16:21 ./usr/share/doc/nanolyse/examples/paired_reads.fastq
-rw-r--r-- root/root       304 2020-06-24 16:21 ./usr/share/doc/nanolyse/run-unit-test
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/lintian/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       118 2020-06-24 16:21 ./usr/share/lintian/overrides/nanolyse
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/man/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/man/man1/
-rw-r--r-- root/root       617 2020-06-24 16:21 ./usr/share/man/man1/NanoLyse.1.gz
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/nanolyse/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/nanolyse/reference/
-rw-r--r-- root/root      3569 2020-05-14 10:07 ./usr/share/nanolyse/reference/DNA_CS.fasta
-rw-r--r-- root/root     15316 2020-06-24 16:21 ./usr/share/nanolyse/reference/lambda.fasta.gz

Timestamp: 24.06.2020 / 17:01:07 (UTC)