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nanolyse_1.1.1-1_amd64.changes (click to toggle)
Format:1.8
Date:Wed, 24 Jun 2020 18:21:30 +0200
Source:nanolyse
Binary:nanolyse
Architecture:source amd64
Version:1.1.1-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Andreas Tille <tille@debian.org>
Description:
nanolyse   - remove lambda phage reads from a fastq file
Closes:963620
Changes:
nanolyse (1.1.1-1) unstable; urgency=medium

  * Initial release (Closes: #963620)
Files:
5b2841a5a162df6978690b542b09966a 1999 science optional nanolyse_1.1.1-1.dsc
83c82daccf7dc3ca59300c0a136a7616 33529 science optional nanolyse_1.1.1.orig.tar.gz
ac8455de197f2862086e4305e79c3561 4600 science optional nanolyse_1.1.1-1.debian.tar.xz
74121d37936543814b8e136c7b439aa4 5952 science optional nanolyse_1.1.1-1_amd64.buildinfo
a1f148d59b7aa7155fc2a18c58265411 24548 science optional nanolyse_1.1.1-1_amd64.deb
nanolyse_1.1.1-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:nanolyse
Binary:nanolyse
Architecture:any
Version:1.1.1-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Andreas Tille <tille@debian.org>
Homepage:https://github.com/wdecoster/nanolyse
Standards-Version:4.5.0
Vcs-Browser:https://salsa.debian.org/med-team/nanolyse
Vcs-Git:https://salsa.debian.org/med-team/nanolyse.git
Testsuite:autopkgtest
Build-Depends:debhelper-compat (=13), dh-python, python3, python3-setuptools
Package-List:nanolyse deb science optional arch=any
Files:
83c82daccf7dc3ca59300c0a136a7616 33529 nanolyse_1.1.1.orig.tar.gz
ac8455de197f2862086e4305e79c3561 4600 nanolyse_1.1.1-1.debian.tar.xz
lintian 2.94.0~bpo10+1 check for nanolyse_1.1.1-1.dsc (click to toggle)
README.source for nanolyse_1.1.1-1.dsc (click to toggle)
No README.source in this package
control file for nanolyse_1.1.1-1_amd64.deb (click to toggle)
Package:nanolyse
Version:1.1.1-1
Architecture:amd64
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:65
Depends:python3-biopython, python3-mappy, python3:any
Section:science
Priority:optional
Homepage:https://github.com/wdecoster/nanolyse
Description:
remove lambda phage reads from a fastq file
 NanoLyse is a tool for rapid removal of contaminant DNA, using the
 Minimap2 aligner through the mappy Python binding. A typical application
 would be the removal of the lambda phage control DNA fragment supplied
 by ONT, for which the reference sequence is included in the package.
 However, this approach may lead to unwanted loss of reads from regions
 highly homologous to the lambda phage genome.
lintian 2.94.0~bpo10+1 check for nanolyse_1.1.1-1_amd64.deb (click to toggle)
contents of nanolyse_1.1.1-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2020-06-24 16:21 ./
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/bin/
-rwxr-xr-x root/root       963 2020-06-24 16:21 ./usr/bin/NanoLyse
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/lib/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/lib/python3/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/
-rw-r--r-- root/root      3551 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/dependency_links.txt
-rw-r--r-- root/root        53 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/entry_points.txt
-rw-r--r-- root/root         0 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/requires.txt
-rw-r--r-- root/root        19 2020-06-24 16:21 ./usr/lib/python3/dist-packages/NanoLyse-1.1.1.egg-info/top_level.txt
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/lib/python3/dist-packages/nanolyse/
-rw-r--r-- root/root      4124 2020-06-24 16:21 ./usr/lib/python3/dist-packages/nanolyse/NanoLyse.py
-rw-r--r-- root/root        33 2020-05-14 10:07 ./usr/lib/python3/dist-packages/nanolyse/__init__.py
-rw-r--r-- root/root        22 2020-05-14 10:07 ./usr/lib/python3/dist-packages/nanolyse/version.py
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/doc/nanolyse/
-rw-r--r-- root/root       278 2020-06-24 16:21 ./usr/share/doc/nanolyse/README.test
-rw-r--r-- root/root       154 2020-06-24 16:21 ./usr/share/doc/nanolyse/changelog.Debian.gz
-rw-r--r-- root/root      1158 2020-06-24 16:21 ./usr/share/doc/nanolyse/copyright
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/doc/nanolyse/examples/
-rw-r--r-- root/root       258 2020-06-24 16:21 ./usr/share/doc/nanolyse/examples/README
-rw-r--r-- root/root      1463 2020-06-24 16:21 ./usr/share/doc/nanolyse/examples/paired_reads.fastq
-rw-r--r-- root/root       304 2020-06-24 16:21 ./usr/share/doc/nanolyse/run-unit-test
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/lintian/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       118 2020-06-24 16:21 ./usr/share/lintian/overrides/nanolyse
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/man/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/man/man1/
-rw-r--r-- root/root       617 2020-06-24 16:21 ./usr/share/man/man1/NanoLyse.1.gz
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/nanolyse/
drwxr-xr-x root/root         0 2020-06-24 16:21 ./usr/share/nanolyse/reference/
-rw-r--r-- root/root      3569 2020-05-14 10:07 ./usr/share/nanolyse/reference/DNA_CS.fasta
-rw-r--r-- root/root     15316 2020-06-24 16:21 ./usr/share/nanolyse/reference/lambda.fasta.gz

Timestamp: 15.09.2020 / 14:11:10 (UTC)