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mview_1.64+dfsg1-1_amd64.changes (click to toggle)
Format:1.8
Date:Fri, 07 Sep 2018 17:28:26 +0200
Source:mview
Binary:mview
Architecture:source all
Version:1.64+dfsg1-1
Distribution:experimental
Urgency:medium
Maintainer:Steffen Moeller <moeller@debian.org>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
mview      - biological sequence alignment conversion
Closes:908233
Changes:
mview (1.64+dfsg1-1) experimental; urgency=medium

  * Initial release (Closes: #908233)
Files:
85a63b855e243c5a26a9b44188501479 1853 science optional mview_1.64+dfsg1-1.dsc
5a47ea9f376971c91096d8eb82b32754 354985 science optional mview_1.64+dfsg1.orig.tar.gz
91e1da35be86e77c94213a586b53b5af 5220 science optional mview_1.64+dfsg1-1.debian.tar.xz
81ecf66d2d7ceda9c33b6ad28ee47ed3 127652 science optional mview_1.64+dfsg1-1_all.deb
be072eb8a727b3c65387904280fed901 5924 science optional mview_1.64+dfsg1-1_amd64.buildinfo
mview_1.64+dfsg1-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:mview
Binary:mview
Architecture:all
Version:1.64+dfsg1-1
Maintainer:Steffen Moeller <moeller@debian.org>
Homepage:https://desmid.github.io/mview/
Standards-Version:4.2.1
Vcs-Browser:https://salsa.debian.org/med-team/mview
Vcs-Git:https://salsa.debian.org/med-team/mview.git
Build-Depends:debhelper (>=11)
Package-List:mview deb science optional arch=all
Files:
5a47ea9f376971c91096d8eb82b32754 354985 mview_1.64+dfsg1.orig.tar.gz
91e1da35be86e77c94213a586b53b5af 5220 mview_1.64+dfsg1-1.debian.tar.xz
lintian check for mview_1.64+dfsg1-1.dsc (click to toggle)
README.source for mview_1.64+dfsg1-1.dsc (click to toggle)
A series of .js libraries have been removed from the source tree.
Please see the "Files-Excluded" lines in debian/copyright for details.
control file for mview_1.64+dfsg1-1_all.deb (click to toggle)
Package:mview
Version:1.64+dfsg1-1
Architecture:all
Maintainer:Steffen Moeller <moeller@debian.org>
Installed-Size:947
Section:science
Priority:optional
Homepage:https://desmid.github.io/mview/
Description:
biological sequence alignment conversion
 mview is a command line utility that extracts and reformats the results
 of a sequence database search or a multiple alignment, optionally adding
 HTML markup for web page layout. It can also be used as a filter to
 extract and convert searches or alignments to common formats.
 .
 Inputs:
  * Sequence database search: BLAST, FASTA suites.
  * Multiple sequence alignment: CLUSTAL, HSSP, MSF, FASTA, PIR, MAF
 Outputs:
  * HTML, FASTA, CLUSTAL, MSF, PIR, RDB (tab-separated).
 .
 The redundancy of that source tree with existing JS packages needs to
 be evaluated. In the interim, the package shall remain in experimental.
lintian check for mview_1.64+dfsg1-1_all.deb (click to toggle)
contents of mview_1.64+dfsg1-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2018-09-07 15:28 ./
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/bin/
-rwxr-xr-x root/root     11442 2018-09-07 15:28 ./usr/bin/mview
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/doc/
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/doc/mview/
-rw-r--r-- root/root       163 2018-09-07 15:28 ./usr/share/doc/mview/changelog.Debian.gz
-rw-r--r-- root/root     11198 2018-09-07 15:28 ./usr/share/doc/mview/changelog.gz
-rw-r--r-- root/root      1154 2018-09-07 15:28 ./usr/share/doc/mview/copyright
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/man/
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/man/man1/
-rw-r--r-- root/root      2588 2018-09-07 15:28 ./usr/share/man/man1/mview.1.gz
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/MView/
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Align/
-rw-r--r-- root/root     18901 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Align/Alignment.pm
-rw-r--r-- root/root      5684 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Align/ColorMixin.pm
-rw-r--r-- root/root      9273 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Align/Consensus.pm
-rw-r--r-- root/root      1042 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Align/Conservation.pm
-rw-r--r-- root/root       202 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Align/Makefile
-rw-r--r-- root/root      2394 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Align/Row.pm
-rw-r--r-- root/root      1324 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Align/Ruler.pm
-rw-r--r-- root/root      6234 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Align/Sequence.pm
-rw-r--r-- root/root      1708 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Align/Special.pm
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/
-rw-r--r-- root/root      2163 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Align.pm
-rw-r--r-- root/root     11976 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Base.pm
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/
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-rw-r--r-- root/root      1296 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/CLUSTAL.pm
-rw-r--r-- root/root      9774 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/FASTA.pm
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-rw-r--r-- root/root     13508 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/FASTA2.pm
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-rw-r--r-- root/root      3358 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/HSSP.pm
-rw-r--r-- root/root      5233 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/JNETZ.pm
-rw-r--r-- root/root      3209 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/MAF.pm
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-rw-r--r-- root/root      2847 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/MULTAS.pm
-rw-r--r-- root/root       455 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/Makefile
-rw-r--r-- root/root      1386 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/PIR.pm
-rw-r--r-- root/root      1423 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/Pearson.pm
-rw-r--r-- root/root      1308 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Format/Plain.pm
-rw-r--r-- root/root       168 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Makefile
-rw-r--r-- root/root      6922 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Row.pm
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-rw-r--r-- root/root     10023 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Scheduler.pm
-rw-r--r-- root/root     10118 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Build/Search.pm
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Color/
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-rw-r--r-- root/root      8906 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Display/Panel.pm
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-rw-r--r-- root/root      6035 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Display/Track.pm
-rw-r--r-- root/root     12372 2018-09-07 15:28 ./usr/share/mview/Bio/MView/GroupMap.pm
-rw-r--r-- root/root       175 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Makefile
-rw-r--r-- root/root      7959 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Manager.pm
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Option/
-rw-r--r-- root/root     13138 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Option/Arguments.pm
-rw-r--r-- root/root       156 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Option/Makefile
-rw-r--r-- root/root     23035 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Option/Options.pm
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-rw-r--r-- root/root      5956 2018-09-07 15:28 ./usr/share/mview/Bio/MView/SRS.pm
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-rw-r--r-- root/root      4619 2018-09-07 15:28 ./usr/share/mview/Bio/MView/Sequence/Reverse.pm
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drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/Parse/
drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/Parse/Format/
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drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/Parse/Format/BLAST1/
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drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/Parse/Format/BLAST2/
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drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/Parse/Format/BLAST2_OF7/
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drwxr-xr-x root/root         0 2018-09-07 15:28 ./usr/share/mview/Bio/Parse/Format/FASTA3/
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Timestamp: 07.09.2018 / 19:01:07 (UTC)