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multiqc_1.7+dfsg-1_amd64.changes (click to toggle)
Format:1.8
Date:Mon, 26 Aug 2019 15:14:06 +0200
Source:multiqc
Binary:multiqc
Architecture:source all
Version:1.7+dfsg-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
multiqc    - output integration for RNA sequencing across tools and samples
Closes:925304
Changes:
multiqc (1.7+dfsg-1) unstable; urgency=medium

  * Initial release (Closes: #925304)
Files:
04dbe41c5f015cff851e03c68dd5e1a6 2196 contrib/science optional multiqc_1.7+dfsg-1.dsc
bc8398167ed29851fa6d4d3dca0d4468 1427304 contrib/science optional multiqc_1.7+dfsg.orig.tar.xz
299c21b4e45a7a584597eb164ec216be 6388 contrib/science optional multiqc_1.7+dfsg-1.debian.tar.xz
03d5a19d229f59e0ed3f3939285ab0e0 515752 contrib/science optional multiqc_1.7+dfsg-1_all.deb
faa4d7b00aad6ad16137a8af0577d6b9 7612 contrib/science optional multiqc_1.7+dfsg-1_amd64.buildinfo
multiqc_1.7+dfsg-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:multiqc
Binary:multiqc
Architecture:all
Version:1.7+dfsg-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Andreas Tille <tille@debian.org>, Steffen Moeller <moeller@debian.org>
Homepage:https://multiqc.info/
Standards-Version:4.4.0
Vcs-Browser:https://salsa.debian.org/med-team/multiqc
Vcs-Git:https://salsa.debian.org/med-team/multiqc.git
Build-Depends:debhelper (>=12~), python3-all, dh-python, python3-setuptools, python3-click, python3-lzstring, python3-jinja2, python3-matplotlib, python3-markdown, python3-numpy, python3-yaml, python3-requests, python3-simplejson, python3-spectra
Package-List:multiqc deb contrib/science optional arch=all
Files:
bc8398167ed29851fa6d4d3dca0d4468 1427304 multiqc_1.7+dfsg.orig.tar.xz
299c21b4e45a7a584597eb164ec216be 6388 multiqc_1.7+dfsg-1.debian.tar.xz
lintian 2.19.0~bpo9+1 check for multiqc_1.7+dfsg-1.dsc (click to toggle)
O: multiqc source: source-is-missing multiqc/modules/fastqc/assets/js/multiqc_fastqc.js line length is 281 characters (>256)
O: multiqc source: source-is-missing multiqc/templates/default/assets/js/multiqc_plotting.js line length is 1130 characters (>512)
O: multiqc source: source-is-missing multiqc/templates/default/assets/js/multiqc_toolbox.js line length is 339 characters (>256)
README.source for multiqc_1.7+dfsg-1.dsc (click to toggle)
MultiQC for Debian - comments on the source tree
================================================

The file debian/copyright instructs uscan, a tool used by Debian
developers to update the source tree when upstream releases a 
new version, to remove a series of files from the then regenerated
tarball:

.eggs directory

  Just a commodity to avoid the source tree to change during the build


external JavaScript libraries 

 multiqc/templates/default/assets/fonts/glyphicons-halflings-regular.*
 multiqc/templates/default/assets/js/packages/bootstrap.min.js
 multiqc/templates/default/assets/js/packages/jquery-3.1.1.min.js
 multiqc/templates/default/assets/js/packages/jquery-ui.min.js
 multiqc/templates/default/assets/js/packages/jquery.tablesorter.min.js
 multiqc/templates/default/assets/js/packages/highcharts.offline-exporting.js
 multiqc/templates/default/assets/js/packages/highcharts.export-csv.js
 multiqc/templates/default/assets/js/packages/highcharts.exporting.js
 multiqc/templates/default/assets/js/packages/highcharts.js
 multiqc/templates/default/assets/js/packages/highcharts.heatmap.js
 multiqc/templates/default/assets/js/packages/lz-string.min.js
 multiqc/templates/default/assets/js/packages/jquery.toast.min.js
 multiqc/templates/default/assets/js/packages/FileSaver.min.js
 multiqc/templates/default/assets/js/packages/clipboard.min.js

 These are in part substituted by Debian packages but for highcharts and
 those which are not packaged for Debian, yet, a reference to a CDN is
 offered, instead.

 Please also see debian/copyright.
control file for multiqc_1.7+dfsg-1_all.deb (click to toggle)
Package:multiqc
Version:1.7+dfsg-1
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:2215
Depends:python3-click, python3-future, python3-jinja2, python3-lzstring, python3-markdown, python3-matplotlib, python3-numpy, python3-requests, python3-simplejson, python3-spectra, python3-yaml, python3:any
Recommends:fonts-glewlwyd, libjs-bootstrap, libjs-jquery, libjs-jquery-tablesorter, libjs-jquery-ui
Suggests:fastqc, fastp, bowtie, bowtie2, trimmomatic, hisat2, salmon, rna-star, tophat, bamtools, bcftools, htseq, picard-tools, rsem, samtools, vcftools
Section:contrib/science
Priority:optional
Homepage:https://multiqc.info/
Description:
output integration for RNA sequencing across tools and samples
 The sequencing of DNA or RNA with current high-throughput technologies
 involves an array of tools and these are applied over a range of samples.
 It is easy to loose oversight. And gathering the data and forwarding
 them in a readable manner to the individuals who took the samples is
 a challenge for a tool in itself. Well. Here it is.
 MultiQC aggregates the output of multiple tools into a single report.
 .
 Reports are generated by scanning given directories for recognised log
 files. These are parsed and a single HTML report is generated summarising
 the statistics for all logs found. MultiQC reports can describe multiple
 analysis steps and large numbers of samples within a single plot, and
 multiple analysis tools making it ideal for routine fast quality control.
lintian 2.19.0~bpo9+1 check for multiqc_1.7+dfsg-1_all.deb (click to toggle)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default/includes.html [<script src="https://code.highcharts.com/highcharts.js" type="text/javascript">] (https://code.highcharts.com/highcharts.js)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default/includes.html [<script src="https://code.highcharts.com/highcharts.heatmap.js" type="text/javascript">] (https://code.highcharts.com/highcharts.heatmap.js)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default/includes.html [<script src="https://code.highcharts.com/highcharts.exporting.js" type="text/javascript">] (https://code.highcharts.com/highcharts.exporting.js)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default/includes.html [<script src="https://code.highcharts.com/highcharts.offline-exporting.js" type="text/javascript">] (https://code.highcharts.com/highcharts.offline-exporting.js)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default/includes.html [<script src="https://code.highcharts.com/highcharts.export-csv.js" type="text/javascript">] (https://code.highcharts.com/highcharts.export-csv.js)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default/includes.html [<script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.4/clipboard.min.js" type="text/javascript">] (https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.4/clipboard.min.js)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default/includes.html [<script src="https://cdnjs.cloudflare.com/ajax/libs/filesaver.js/1.3.8/filesaver.min.js" type="text/javascript">] (https://cdnjs.cloudflare.com/ajax/libs/filesaver.js/1.3.8/filesaver.min.js)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default/includes.html [<script src="https://cdnjs.cloudflare.com/ajax/libs/lz-string/1.4.4/lz-string.min.js" type="text/javascript">] (https://cdnjs.cloudflare.com/ajax/libs/lz-string/1.4.4/lz-string.min.js)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default/includes.html [<script src="https://cdnjs.cloudflare.com/ajax/libs/jquery-toast-plugin/1.3.2/jquery.toast.min.js" type="text/javascript">] (https://cdnjs.cloudflare.com/ajax/libs/jquery-toast-plugin/1.3.2/jquery.toast.min.js)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default_dev/includes.html [<script type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.4/clipboard.min.js">] (https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.4/clipboard.min.js)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default_dev/includes.html [<script type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/filesaver.js/1.3.8/filesaver.min.js">] (https://cdnjs.cloudflare.com/ajax/libs/filesaver.js/1.3.8/filesaver.min.js)
N: To overcome the license restriction of highcharts and provide packages not yet packaged - it is in contrib after all
O: multiqc: privacy-breach-generic usr/lib/python3/dist-packages/multiqc/templates/default_dev/includes.html [<script type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/lz-string/1.4.4/lz-string.min.js">] (https://cdnjs.cloudflare.com/ajax/libs/lz-string/1.4.4/lz-string.min.js)
contents of multiqc_1.7+dfsg-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2019-08-26 13:14 ./
drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/
drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/bin/
-rwxr-xr-x root/root     33517 2019-08-26 13:14 ./usr/bin/multiqc
drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/
drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/
drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/
-rw-r--r-- root/root       123 2019-08-23 15:58 ./usr/lib/python3/dist-packages/multiqc/__init__.py
drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/
-rw-r--r-- root/root         0 2019-08-23 15:58 ./usr/lib/python3/dist-packages/multiqc/modules/__init__.py
drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/adapterRemoval/
-rw-r--r-- root/root        81 2019-08-23 15:58 ./usr/lib/python3/dist-packages/multiqc/modules/adapterRemoval/__init__.py
-rw-r--r-- root/root     13379 2019-08-23 15:58 ./usr/lib/python3/dist-packages/multiqc/modules/adapterRemoval/adapterRemoval.py
drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/afterqc/
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drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/bamtools/
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drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/bbmap/
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drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/busco/
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drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/clipandmerge/
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drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/clusterflow/
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drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/conpair/
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drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/custom_content/
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drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/cutadapt/
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drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/dedup/
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drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/deeptools/
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drwxr-xr-x root/root         0 2019-08-26 13:14 ./usr/lib/python3/dist-packages/multiqc/modules/disambiguate/
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Timestamp: 26.08.2019 / 14:07:06 (UTC)