Debian NEW package overview for libgoby-java
libgoby-java_3.3.1+dfsg2-1_amd64.changes (click to toggle)
Format:1.8
Date:Wed, 18 Aug 2021 11:14:57 +0200
Source:libgoby-java
Binary:goby-java libgoby-io-java
Architecture:source all
Version:3.3.1+dfsg2-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Pierre Gruet <pgt@debian.org>
Description:
goby-java  - next-generation sequencing data and results analysis tool
libgoby-io-java - IO API for goby
Closes:992044
Changes:
libgoby-java (3.3.1+dfsg2-1) unstable; urgency=medium

  * Initial release (Closes: #992044)
Files:
6f5adeaa61ffa8659cf1627a07220155 2950 science optional libgoby-java_3.3.1+dfsg2-1.dsc
3a8dbf45ef2c54ec3073240850acbc75 41577532 science optional libgoby-java_3.3.1+dfsg2.orig.tar.xz
05fd7b5c4ea72e681162593ebfa52448 25044 science optional libgoby-java_3.3.1+dfsg2-1.debian.tar.xz
f22fde179e90e6cabd4c36aa4934ddc9 1558004 science optional goby-java_3.3.1+dfsg2-1_all.deb
a4fb404dd3b2acf046cc45b6473b1edd 973812 science optional libgoby-io-java_3.3.1+dfsg2-1_all.deb
fc96de9e4914f911ceccb258301f46ac 18863 science optional libgoby-java_3.3.1+dfsg2-1_amd64.buildinfo
libgoby-java_3.3.1+dfsg2-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:libgoby-java
Binary:libgoby-io-java, goby-java
Architecture:all
Version:3.3.1+dfsg2-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Pierre Gruet <pgt@debian.org>, Andreas Tille <tille@debian.org>
Homepage:http://campagnelab.org/software/goby/
Standards-Version:4.5.1
Vcs-Browser:https://salsa.debian.org/med-team/libgoby-java/
Vcs-Git:https://salsa.debian.org/med-team/libgoby-java.git
Testsuite:autopkgtest
Build-Depends:debhelper-compat (=13), maven-debian-helper, javahelper, default-jdk, ant, ant-contrib, libjbzip2-java, libcommons-collections3-java, libcommons-configuration-java, libcommons-exec-java, libcommons-io-java, libcommons-lang-java, libcommons-logging-java, libcommons-math-java, libcommons-cli-java, libdistlib-java, liblog4j1.2-java, libexec-maven-plugin-java, libmaven-assembly-plugin-java, libmaven-antrun-plugin-java, libbuild-helper-maven-plugin-java, libmaven-dependency-plugin-java, libmaven-source-plugin-java, libmaven-javadoc-plugin-java, libprotobuf-java, libhtsjdk-java, libfastutil-java, protobuf-compiler, libjsap-java, libdsiutils-java, libicb-utils-java, libreflections-java, libpj-java, libprotobuf-dev, libpcre3-dev, pkg-config, r-cran-rjava, libeasymock-java<!nocheck>, junit4<!nocheck>, testng<!nocheck>, libpicard-java<!nocheck>
Package-List:goby-java deb science optional arch=all libgoby-io-java deb science optional arch=all
Files:
3a8dbf45ef2c54ec3073240850acbc75 41577532 libgoby-java_3.3.1+dfsg2.orig.tar.xz
05fd7b5c4ea72e681162593ebfa52448 25044 libgoby-java_3.3.1+dfsg2-1.debian.tar.xz
lintian 2.94.0~bpo10+1 check for libgoby-java_3.3.1+dfsg2-1.dsc (click to toggle)
README.source for libgoby-java_3.3.1+dfsg2-1.dsc (click to toggle)
No README.source in this package
control file for goby-java_3.3.1+dfsg2-1_all.deb (click to toggle)
Package:goby-java
Source:libgoby-java
Version:3.3.1+dfsg2-1
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:1678
Depends:default-jre, libgoby-io-java (=3.3.1+dfsg2-1), libdistlib-java, r-cran-rjava
Section:science
Priority:optional
Homepage:http://campagnelab.org/software/goby/
Description:
next-generation sequencing data and results analysis tool
 Goby is a next-gen data management framework designed to facilitate the
 implementation of efficient data analysis pipelines.
 .
 Goby provides very efficient file formats to store next-generation sequencing
 data and intermediary analysis results.
 .
 Goby also provides utilities that implement common next-gen data computations.
 These utilities are designed to be relatively easy to use, yet very efficient.
 .
 This package provides the entire Goby framework, including application
 programs (i.e., Goby modes). It is released under the GPL3 license.
lintian 2.94.0~bpo10+1 check for goby-java_3.3.1+dfsg2-1_all.deb (click to toggle)
contents of goby-java_3.3.1+dfsg2-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2021-08-18 09:14 ./
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/bin/
-rwxr-xr-x root/root      1935 2021-08-18 09:14 ./usr/bin/goby
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/doc/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/doc/goby-java/
-rw-r--r-- root/root       162 2021-08-18 09:14 ./usr/share/doc/goby-java/changelog.Debian.gz
-rw-r--r-- root/root     28065 2018-01-09 15:21 ./usr/share/doc/goby-java/changelog.gz
-rw-r--r-- root/root     11109 2021-08-18 08:35 ./usr/share/doc/goby-java/copyright
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/java/
-rw-r--r-- root/root   1632953 2021-08-18 09:14 ./usr/share/java/goby-distribution.jar
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/man/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/man/man1/
-rw-r--r-- root/root      1445 2021-08-18 09:14 ./usr/share/man/man1/goby.1.gz
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-distribution/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-distribution/3.3.1/
-rw-r--r-- root/root      9215 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-distribution/3.3.1/goby-distribution-3.3.1.pom
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-distribution/debian/
-rw-r--r-- root/root      9216 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-distribution/debian/goby-distribution-debian.pom
lrwxrwxrwx root/root         0 2021-08-18 09:14 ./usr/share/java/goby-distribution-3.3.1.jar -> goby-distribution.jar
lrwxrwxrwx root/root         0 2021-08-18 09:14 ./usr/share/java/goby.jar -> goby-distribution.jar
lrwxrwxrwx root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-distribution/3.3.1/goby-distribution-3.3.1.jar -> ../../../../../../java/goby-distribution.jar
lrwxrwxrwx root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-distribution/debian/goby-distribution-debian.jar -> ../../../../../../java/goby-distribution.jar
control file for libgoby-io-java_3.3.1+dfsg2-1_all.deb (click to toggle)
Package:libgoby-io-java
Source:libgoby-java
Version:3.3.1+dfsg2-1
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:1058
Depends:libcommons-cli-java (>=1.4), libcommons-configuration-java, libcommons-exec-java (>=1.3), libcommons-io-java (>=2.8.0), libcommons-lang-java (>=2.6), libcommons-logging-java (>=1.2), libcommons-math-java (>=2.2), libdsiutils-java, libfastutil-java, libguava-java, libhtsjdk-java (>=2.14.3), libicb-utils-java, libjsap-java (>=2.1), libprotobuf-java, libreflections-java, libslf4j-java (>=1.7.30), libxstream-java (>=1.4.15), libcommons-collections3-java, libjbzip2-java, libpj-java
Section:science
Priority:optional
Homepage:http://campagnelab.org/software/goby/
Description:
IO API for goby
 Goby is a next-gen data management framework designed to facilitate the
 implementation of efficient data analysis pipelines.
 .
 Goby provides very efficient file formats to store next-generation sequencing
 data and intermediary analysis results.
 .
 This package contains the Goby IO API, including code necessary to read and
 write Goby file formats. It is released under the LGPL3 license.
lintian 2.94.0~bpo10+1 check for libgoby-io-java_3.3.1+dfsg2-1_all.deb (click to toggle)
contents of libgoby-io-java_3.3.1+dfsg2-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2021-08-18 09:14 ./
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/doc/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/doc/libgoby-io-java/
-rw-r--r-- root/root       162 2021-08-18 09:14 ./usr/share/doc/libgoby-io-java/changelog.Debian.gz
-rw-r--r-- root/root     28065 2018-01-09 15:21 ./usr/share/doc/libgoby-io-java/changelog.gz
-rw-r--r-- root/root     11109 2021-08-18 08:35 ./usr/share/doc/libgoby-io-java/copyright
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/java/
-rw-r--r-- root/root   1004463 2021-08-18 09:14 ./usr/share/java/goby-io.jar
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/lintian/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       134 2021-08-09 11:35 ./usr/share/lintian/overrides/libgoby-io-java
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-framework/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-framework/3.3.1/
-rw-r--r-- root/root      1298 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-framework/3.3.1/goby-framework-3.3.1.pom
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-framework/debian/
-rw-r--r-- root/root      1299 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-framework/debian/goby-framework-debian.pom
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-io/
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-io/3.3.1/
-rw-r--r-- root/root      4946 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-io/3.3.1/goby-io-3.3.1.pom
drwxr-xr-x root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-io/debian/
-rw-r--r-- root/root      4947 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-io/debian/goby-io-debian.pom
lrwxrwxrwx root/root         0 2021-08-18 09:14 ./usr/share/java/goby-io-3.3.1.jar -> goby-io.jar
lrwxrwxrwx root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-io/3.3.1/goby-io-3.3.1.jar -> ../../../../../../java/goby-io.jar
lrwxrwxrwx root/root         0 2021-08-18 09:14 ./usr/share/maven-repo/org/campagnelab/goby/goby-io/debian/goby-io-debian.jar -> ../../../../../../java/goby-io.jar

Timestamp: 18.08.2021 / 10:01:04 (UTC)