Debian NEW package overview for fastq-pair
| fastq-pair_1.0-1_amd64.changes (click to toggle) | |
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| Format: | 1.8 |
| Date: | Thu, 01 Apr 2021 17:24:29 +0530 |
| Source: | fastq-pair |
| Binary: | fastq-pair fastq-pair-dbgsym |
| Architecture: | source amd64 |
| Version: | 1.0-1 |
| Distribution: | unstable |
| Urgency: | medium |
| Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| Changed-By: | Nilesh Patra <nilesh@debian.org> |
| Description: | fastq-pair - Rewrites paired end fastq so all reads have a mate to separate ou |
| Closes: | 986242 |
| Changes: | fastq-pair (1.0-1) unstable; urgency=medium * Initial release (Closes: #986242) |
| Files: | 6b1b4847e8c54450e3813a23f3ebf48d 1983 science optional fastq-pair_1.0-1.dsc 57de13c5e683c07e75875152078fda5c 217101 science optional fastq-pair_1.0.orig.tar.gz b29346e79b8db8a78f391de915cce594 3288 science optional fastq-pair_1.0-1.debian.tar.xz 0d3522a9131f57c51a1fbbf95a572e52 12396 debug optional fastq-pair-dbgsym_1.0-1_amd64.deb 4d0cc1bc20a0001da54fb8050bfa39cc 6670 science optional fastq-pair_1.0-1_amd64.buildinfo 32ebf2904f1f2ab6f6e01ca0a8263a7d 7304 science optional fastq-pair_1.0-1_amd64.deb |
| fastq-pair_1.0-1.dsc (click to toggle) | |
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| Format: | 3.0 (quilt) |
| Source: | fastq-pair |
| Binary: | fastq-pair |
| Architecture: | any |
| Version: | 1.0-1 |
| Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| Uploaders: | Nilesh Patra <nilesh@debian.org> |
| Homepage: | https://github.com/linsalrob/fastq-pair |
| Standards-Version: | 4.5.1 |
| Vcs-Browser: | https://salsa.debian.org/med-team/fastq-pair |
| Vcs-Git: | https://salsa.debian.org/med-team/fastq-pair.git |
| Testsuite: | autopkgtest |
| Build-Depends: | debhelper-compat (=13), cmake |
| Package-List: | fastq-pair deb science optional arch=any |
| Files: | 57de13c5e683c07e75875152078fda5c 217101 fastq-pair_1.0.orig.tar.gz b29346e79b8db8a78f391de915cce594 3288 fastq-pair_1.0-1.debian.tar.xz |
| control file for fastq-pair_1.0-1_amd64.deb (click to toggle) | |
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| Package: | fastq-pair |
| Version: | 1.0-1 |
| Architecture: | amd64 |
| Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| Installed-Size: | 27 |
| Depends: | libc6 (>=2.14) |
| Section: | science |
| Priority: | optional |
| Homepage: | https://github.com/linsalrob/fastq-pair |
| Description: | Rewrites paired end fastq so all reads have a mate to separate out singletons This package rewrites the fastq files with the sequences in order, with matching files for the two files provided on the command line, and then any single reads that are not matched are place in two separate files, one for each original file. . This code is designed to be fast and memory efficient, and works with large fastq files. It does not store the whole file in memory, but rather just stores the locations of each of the indices in the first file provided in memory. |
| contents of fastq-pair_1.0-1_amd64.deb (click to toggle) | |
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drwxr-xr-x root/root 0 2021-04-01 11:54 ./ drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/ drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/bin/ -rwxr-xr-x root/root 14328 2021-04-01 11:54 ./usr/bin/fastq_pair drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/share/ drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/share/doc/fastq-pair/ -rw-r--r-- root/root 157 2021-04-01 11:54 ./usr/share/doc/fastq-pair/changelog.Debian.gz -rw-r--r-- root/root 1507 2021-04-01 11:44 ./usr/share/doc/fastq-pair/copyright drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/share/man/ drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/share/man/man1/ -rw-r--r-- root/root 424 2021-04-01 11:54 ./usr/share/man/man1/fastq_pair.1.gz | |
| copyright of fastq-pair_1.0-1_amd64.deb (click to toggle) | |
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Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: fastq-pair Source: https://github.com/linsalrob/fastq-pair/releases Files: * Copyright: 2017, Rob Edwards License: Expat Comment: The files robstr.c and robstr.h have been taken from https://github.com/linsalrob/ceeqlib which have the same upstream author and same License Files: debian/* Copyright: 2020 Nilesh Patra <nilesh@debian.org> License: Expat License: Expat Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: . The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. . THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. | |
| control file for fastq-pair-dbgsym_1.0-1_amd64.deb (click to toggle) | |
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| Package: | fastq-pair-dbgsym |
| Source: | fastq-pair |
| Version: | 1.0-1 |
| Auto-Built-Package: | debug-symbols |
| Architecture: | amd64 |
| Maintainer: | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| Installed-Size: | 27 |
| Depends: | fastq-pair (=1.0-1) |
| Section: | debug |
| Priority: | optional |
| Description: | debug symbols for fastq-pair |
| Build-Ids: | c58b7c98d5b9a6c694f6b64bf2cd3947494c6287 |
| contents of fastq-pair-dbgsym_1.0-1_amd64.deb (click to toggle) | |
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drwxr-xr-x root/root 0 2021-04-01 11:54 ./ drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/ drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/lib/ drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/lib/debug/ drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/lib/debug/.build-id/c5/ -rw-r--r-- root/root 16592 2021-04-01 11:54 ./usr/lib/debug/.build-id/c5/8b7c98d5b9a6c694f6b64bf2cd3947494c6287.debug drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/share/ drwxr-xr-x root/root 0 2021-04-01 11:54 ./usr/share/doc/ lrwxrwxrwx root/root 0 2021-04-01 11:54 ./usr/share/doc/fastq-pair-dbgsym -> fastq-pair | |
| copyright of fastq-pair-dbgsym_1.0-1_amd64.deb (click to toggle) | |
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WARNING: No copyright found, please check package manually. | |
Timestamp: 01.04.2021 / 13:00:55 (UTC)