Debian NEW package overview for catfishq
catfishq_1.1.3+ds-1_amd64.changes (click to toggle)
Format:1.8
Date:Sun, 23 May 2021 16:48:44 +0200
Source:catfishq
Binary:catfishq
Architecture:source all
Version:1.1.3+ds-1
Distribution:unstable
Urgency:medium
Maintainer:Steffen Moeller <moeller@debian.org>
Changed-By:Steffen Moeller <moeller@debian.org>
Description:
catfishq   - concatenates fastq files
Closes:989015
Changes:
catfishq (1.1.3+ds-1) unstable; urgency=medium

  [ Steffen Moeller ]
  * Initial release (Closes: #989015).

  [ tony mancill ]
  * Add Bug-Submit and Bug-Database fields to debian/upstream/metadata
  * Add Repository[-Browse] fields to debian/upstream/metadata
  * Add basic autopkgtest case for dedup, recursive, and .gz files
Files:
b9616951ba90e1254f01b17496ffd685 1943 science optional catfishq_1.1.3+ds-1.dsc
62ef6de633552114a00e6721e1d19236 3928 science optional catfishq_1.1.3+ds.orig.tar.xz
aba374ff3f8b63cdff72c4725b1f2ce5 3980 science optional catfishq_1.1.3+ds-1.debian.tar.xz
01c21bf87da7ef8e2d9be5ec21b31534 7752 science optional catfishq_1.1.3+ds-1_all.deb
c199a0dca4f6fdecdd50e2701ad090b0 6271 science optional catfishq_1.1.3+ds-1_amd64.buildinfo
catfishq_1.1.3+ds-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:catfishq
Binary:catfishq
Architecture:all
Version:1.1.3+ds-1
Maintainer:Steffen Moeller <moeller@debian.org>
Homepage:https://github.com/philres/catfishq
Standards-Version:4.5.1
Vcs-Browser:https://salsa.debian.org/med-team/catfishq
Vcs-Git:https://salsa.debian.org/med-team/catfishq.git
Testsuite:autopkgtest
Build-Depends:debhelper-compat (=13), dh-python, python3-setuptools, python3-all
Package-List:catfishq deb science optional arch=all
Files:
62ef6de633552114a00e6721e1d19236 3928 catfishq_1.1.3+ds.orig.tar.xz
aba374ff3f8b63cdff72c4725b1f2ce5 3980 catfishq_1.1.3+ds-1.debian.tar.xz
lintian 2.94.0~bpo10+1 check for catfishq_1.1.3+ds-1.dsc (click to toggle)
README.source for catfishq_1.1.3+ds-1.dsc (click to toggle)
The license was stated on the github page
(https://github.com/philres/catfishq) but apparently did not make it
into the PyPI archive.
Informed upstream via https://github.com/philres/catfishq/issues/10
control file for catfishq_1.1.3+ds-1_all.deb (click to toggle)
Package:catfishq
Version:1.1.3+ds-1
Architecture:all
Maintainer:Steffen Moeller <moeller@debian.org>
Installed-Size:36
Depends:python3-pysam, python3:any
Section:science
Priority:optional
Homepage:https://github.com/philres/catfishq
Description:
concatenates fastq files
 FASTQ is the most common format to store the reads from high-throughput
 biological sequencing. This tool takes paths to an arbritary number
 of zipped and unzipped FASTQ files and/or folders containing zipped or
 unzipped FASTQ files, concatenates them and prints them to standard out
 (default) or an unzipped output file.
 .
 Supported file extensions are: '*.fastq', '*.fastq.gz', '*.fasta',
 '*.fasta.gz', '*.fa', '*.fa.gz', '*.fq', '*.fq.gz'
lintian 2.94.0~bpo10+1 check for catfishq_1.1.3+ds-1_all.deb (click to toggle)
contents of catfishq_1.1.3+ds-1_all.deb (click to toggle)
drwxr-xr-x root/root         0 2021-05-23 14:48 ./
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/bin/
-rwxr-xr-x root/root       963 2021-05-23 14:48 ./usr/bin/catfishq
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/lib/
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/lib/python3/
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/lib/python3/dist-packages/catfishq/
-rw-r--r-- root/root         0 2020-10-01 19:40 ./usr/lib/python3/dist-packages/catfishq/__init__.py
-rw-r--r-- root/root     10150 2021-05-13 10:18 ./usr/lib/python3/dist-packages/catfishq/cat_fastq.py
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/lib/python3/dist-packages/catfishq-1.1.3.egg-info/
-rw-r--r-- root/root       190 2021-05-23 14:48 ./usr/lib/python3/dist-packages/catfishq-1.1.3.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2021-05-23 14:48 ./usr/lib/python3/dist-packages/catfishq-1.1.3.egg-info/dependency_links.txt
-rw-r--r-- root/root        54 2021-05-23 14:48 ./usr/lib/python3/dist-packages/catfishq-1.1.3.egg-info/entry_points.txt
-rw-r--r-- root/root         1 2020-10-01 19:44 ./usr/lib/python3/dist-packages/catfishq-1.1.3.egg-info/not-zip-safe
-rw-r--r-- root/root         0 2021-05-23 14:48 ./usr/lib/python3/dist-packages/catfishq-1.1.3.egg-info/requires.txt
-rw-r--r-- root/root         9 2021-05-23 14:48 ./usr/lib/python3/dist-packages/catfishq-1.1.3.egg-info/top_level.txt
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/share/
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/share/doc/
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/share/doc/catfishq/
-rw-r--r-- root/root       284 2021-05-23 14:48 ./usr/share/doc/catfishq/changelog.Debian.gz
-rw-r--r-- root/root      1860 2021-05-23 14:48 ./usr/share/doc/catfishq/copyright
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/share/man/
drwxr-xr-x root/root         0 2021-05-23 14:48 ./usr/share/man/man1/
-rw-r--r-- root/root       942 2021-05-23 14:48 ./usr/share/man/man1/catfishq.1.gz

Timestamp: 23.05.2021 / 21:00:56 (UTC)