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bwa-mem2_2.0-1_amd64.changes (click to toggle)
Format:1.8
Date:Thu, 09 Jul 2020 14:31:25 +0200
Source:bwa-mem2
Binary:bwa-mem2 bwa-mem2-dbgsym
Architecture:source amd64
Version:2.0-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Michael R. Crusoe <crusoe@debian.org>
Description:
bwa-mem2   - Sequence alignment using Burrows-Wheeler Transform
Closes:950607
Changes:
bwa-mem2 (2.0-1) unstable; urgency=medium

  * Initial release. (Closes: #950607)
Files:
34db65d4ac3937aebb6b92a73b9f565d 1974 science optional bwa-mem2_2.0-1.dsc
284ca12f3363bdcbfb9c949650c60262 227492 science optional bwa-mem2_2.0.orig.tar.xz
2f7992e6061b77eb7212549c6270451b 7292 science optional bwa-mem2_2.0-1.debian.tar.xz
c50c8ae6942a74bea5dd69bdff7e546d 1502792 debug optional bwa-mem2-dbgsym_2.0-1_amd64.deb
08e9df7ba53742b8b68c50e1142ee0c4 5944 science optional bwa-mem2_2.0-1_amd64.buildinfo
28c6578076aa902e09ada8fa1e1f397d 282572 science optional bwa-mem2_2.0-1_amd64.deb
bwa-mem2_2.0-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:bwa-mem2
Binary:bwa-mem2
Architecture:any
Version:2.0-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Dylan Aïssi <daissi@debian.org>, Michael R. Crusoe <crusoe@debian.org>
Homepage:https://github.com/bwa-mem2/bwa-mem2
Standards-Version:4.5.0
Vcs-Browser:https://salsa.debian.org/med-team/bwa-mem2
Vcs-Git:https://salsa.debian.org/med-team/bwa-mem2.git
Build-Depends:debhelper-compat (=13), zlib1g-dev, libsimde-dev, help2man
Package-List:bwa-mem2 deb science optional arch=any
Files:
284ca12f3363bdcbfb9c949650c60262 227492 bwa-mem2_2.0.orig.tar.xz
2f7992e6061b77eb7212549c6270451b 7292 bwa-mem2_2.0-1.debian.tar.xz
lintian 2.79.0~bpo10+1 check for bwa-mem2_2.0-1.dsc (click to toggle)
README.source for bwa-mem2_2.0-1.dsc (click to toggle)
No README.source in this package
control file for bwa-mem2_2.0-1_amd64.deb (click to toggle)
Package:bwa-mem2
Version:2.0-1
Architecture:amd64
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:1342
Depends:libc6 (>=2.29), libgcc-s1 (>=3.4), libstdc++6 (>=5.2), zlib1g (>=1:1.1.4)
Section:science
Priority:optional
Homepage:https://github.com/bwa-mem2/bwa-mem2
Description:
Sequence alignment using Burrows-Wheeler Transform
 BWA is a software package for mapping low-divergent sequences against
 a large reference genome, such as the human genome. It consists of
 three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first
 algorithm is designed for Illumina sequence reads up to 100bp, while
 the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM
 and BWA-SW share similar features such as long-read support and split
 alignment, but BWA-MEM, which is the latest, is generally recommended
 for high-quality queries as it is faster and more accurate. BWA-MEM
 also has better performance than BWA-backtrack for 70-100bp Illumina
 reads.
lintian 2.79.0~bpo10+1 check for bwa-mem2_2.0-1_amd64.deb (click to toggle)
W: bwa-mem2: binary-without-manpage usr/bin/bwa-mem2.avx2
W: bwa-mem2: binary-without-manpage usr/bin/bwa-mem2.avx512bw
W: bwa-mem2: binary-without-manpage usr/bin/bwa-mem2.sse2
W: bwa-mem2: binary-without-manpage usr/bin/bwa-mem2.sse41
contents of bwa-mem2_2.0-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2020-07-09 12:31 ./
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/bin/
-rwxr-xr-x root/root     14488 2020-07-09 12:31 ./usr/bin/bwa-mem2
-rwxr-xr-x root/root    330312 2020-07-09 12:31 ./usr/bin/bwa-mem2.avx2
-rwxr-xr-x root/root    346696 2020-07-09 12:31 ./usr/bin/bwa-mem2.avx512bw
-rwxr-xr-x root/root    326216 2020-07-09 12:31 ./usr/bin/bwa-mem2.sse2
-rwxr-xr-x root/root    330312 2020-07-09 12:31 ./usr/bin/bwa-mem2.sse41
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/share/
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/share/doc/bwa-mem2/
-rw-r--r-- root/root       899 2020-07-09 12:31 ./usr/share/doc/bwa-mem2/NEWS.md.gz
-rw-r--r-- root/root      4020 2020-07-09 12:31 ./usr/share/doc/bwa-mem2/README.md
-rw-r--r-- root/root       160 2020-07-09 12:31 ./usr/share/doc/bwa-mem2/changelog.Debian.gz
-rw-r--r-- root/root      4754 2020-07-09 12:31 ./usr/share/doc/bwa-mem2/copyright
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/share/man/
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/share/man/man1/
-rw-r--r-- root/root      1669 2020-07-09 12:31 ./usr/share/man/man1/bwa-mem2-mem.1.gz
-rw-r--r-- root/root       284 2020-07-09 12:31 ./usr/share/man/man1/bwa-mem2.1.gz
control file for bwa-mem2-dbgsym_2.0-1_amd64.deb (click to toggle)
Package:bwa-mem2-dbgsym
Source:bwa-mem2
Version:2.0-1
Auto-Built-Package:debug-symbols
Architecture:amd64
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:1607
Depends:bwa-mem2 (=2.0-1)
Section:debug
Priority:optional
Description:
debug symbols for bwa-mem2
Build-Ids:2873f958c4a4beb3674847ec170bf52730db8254 5afeb9b0bbaf041a3377de5e26e36c17c403bfbf 5e3605aa33d100ea622726aae01167ba99037989 8d2a576b56e822e15eca5e8440bfd21f1d743d3c 8fead96d21349f49e4bf60f720e1af6b8de56370
lintian 2.79.0~bpo10+1 check for bwa-mem2-dbgsym_2.0-1_amd64.deb (click to toggle)
contents of bwa-mem2-dbgsym_2.0-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2020-07-09 12:31 ./
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/lib/
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/lib/debug/.build-id/28/
-rw-r--r-- root/root    378712 2020-07-09 12:31 ./usr/lib/debug/.build-id/28/73f958c4a4beb3674847ec170bf52730db8254.debug
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/lib/debug/.build-id/5a/
-rw-r--r-- root/root     15944 2020-07-09 12:31 ./usr/lib/debug/.build-id/5a/feb9b0bbaf041a3377de5e26e36c17c403bfbf.debug
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/lib/debug/.build-id/5e/
-rw-r--r-- root/root    398400 2020-07-09 12:31 ./usr/lib/debug/.build-id/5e/3605aa33d100ea622726aae01167ba99037989.debug
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/lib/debug/.build-id/8d/
-rw-r--r-- root/root    381024 2020-07-09 12:31 ./usr/lib/debug/.build-id/8d/2a576b56e822e15eca5e8440bfd21f1d743d3c.debug
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/lib/debug/.build-id/8f/
-rw-r--r-- root/root    376968 2020-07-09 12:31 ./usr/lib/debug/.build-id/8f/ead96d21349f49e4bf60f720e1af6b8de56370.debug
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/lib/debug/.dwz/x86_64-linux-gnu/
-rw-r--r-- root/root     74064 2020-07-09 12:31 ./usr/lib/debug/.dwz/x86_64-linux-gnu/bwa-mem2.debug
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/share/
drwxr-xr-x root/root         0 2020-07-09 12:31 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-07-09 12:31 ./usr/share/doc/bwa-mem2-dbgsym -> bwa-mem2

Timestamp: 09.07.2020 / 18:01:12 (UTC)