corner image corner image corner image corner image Debian NEW package overview for bcalm
bcalm_2.2.1-1_amd64.changes (click to toggle)
Format:1.8
Date:Fri, 27 Sep 2019 08:49:22 +0200
Source:bcalm
Binary:bcalm
Architecture:source amd64
Version:2.2.1-1
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Shayan Doust <hello@shayandoust.me>
Description:
bcalm      - de Bruijn compaction in low memory
Closes:941280
Changes:
bcalm (2.2.1-1) unstable; urgency=medium

  * Initial release (Closes: #941280)
Files:
287a5c9f2311cb3836a93c656efdb095 1983 science optional bcalm_2.2.1-1.dsc
f7471922a0500db1c3178acb027cce2d 129524 science optional bcalm_2.2.1.orig.tar.gz
bde552b2f8db9109b788426fade26451 8544 science optional bcalm_2.2.1-1.debian.tar.xz
7b2e65cc2a2ca0dfbc613a810a96c47a 365102 debug optional bcalm-dbgsym_2.2.1-1_amd64.deb
aa1880aab5210715853d5a6a85a894e2 7332 science optional bcalm_2.2.1-1_amd64.buildinfo
fa3f31c6bb5c20cbe3a40c43686d4c2e 22868 science optional bcalm_2.2.1-1_amd64.deb
bcalm_2.2.1-1.dsc (click to toggle)
Format:3.0 (quilt)
Source:bcalm
Binary:bcalm
Architecture:any
Version:2.2.1-1
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:Shayan Doust <hello@shayandoust.me>
Homepage:https://github.com/GATB/bcalm
Standards-Version:4.4.0
Vcs-Browser:https://salsa.debian.org/med-team/bcalm
Vcs-Git:https://salsa.debian.org/med-team/bcalm.git
Testsuite:autopkgtest
Build-Depends:debhelper-compat (=12), libgatbcore-dev, libboost-dev, libhdf5-dev, zlib1g-dev, cmake
Package-List:bcalm deb science optional arch=any
Files:
f7471922a0500db1c3178acb027cce2d 129524 bcalm_2.2.1.orig.tar.gz
bde552b2f8db9109b788426fade26451 8544 bcalm_2.2.1-1.debian.tar.xz
lintian 2.24.0~bpo9+2 check for bcalm_2.2.1-1.dsc (click to toggle)
README.source for bcalm_2.2.1-1.dsc (click to toggle)
No README.source in this package
control file for bcalm_2.2.1-1_amd64.deb (click to toggle)
Package:bcalm
Version:2.2.1-1
Architecture:amd64
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:84
Depends:libc6 (>=2.14), libgatbcore2 (>=1.4.1+git20190813.a73b6dd+dfsg), libgcc1 (>=1:3.0), libhdf5-103, libstdc++6 (>=5.2)
Section:science
Priority:optional
Homepage:https://github.com/GATB/bcalm
Description:
de Bruijn compaction in low memory
 A bioinformatics tool for constructing the compacted de Bruijn graph
 from sequencing data.
 .
 This is the parallel version of the BCALM software using gatb-core
 library.
lintian 2.24.0~bpo9+2 check for bcalm_2.2.1-1_amd64.deb (click to toggle)
contents of bcalm_2.2.1-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2019-09-27 06:49 ./
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/bin/
-rwxr-xr-x root/root     43184 2019-09-27 06:49 ./usr/bin/bcalm
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/share/
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/share/doc/bcalm/
-rw-r--r-- root/root      2467 2018-12-24 14:29 ./usr/share/doc/bcalm/README.md.gz
-rw-r--r-- root/root       154 2019-09-27 06:49 ./usr/share/doc/bcalm/changelog.Debian.gz
-rw-r--r-- root/root      3865 2019-09-27 06:49 ./usr/share/doc/bcalm/copyright
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/share/doc/bcalm/test/
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/share/doc/bcalm/test/circular_unitigs_unittests/
-rw-r--r-- root/root       190 2019-09-27 06:49 ./usr/share/doc/bcalm/test/circular_unitigs_unittests/CMD
-rw-r--r-- root/root        79 2018-12-24 14:29 ./usr/share/doc/bcalm/test/circular_unitigs_unittests/README
-rw-r--r-- root/root        97 2018-12-24 14:29 ./usr/share/doc/bcalm/test/circular_unitigs_unittests/test1.fa
-rw-r--r-- root/root        37 2018-12-24 14:29 ./usr/share/doc/bcalm/test/circular_unitigs_unittests/test2.fa
-rw-r--r-- root/root       134 2018-12-24 14:29 ./usr/share/doc/bcalm/test/circular_unitigs_unittests/test3.fa
-rw-r--r-- root/root      1147 2019-09-27 06:49 ./usr/share/doc/bcalm/test/compare_fasta.py
-rw-r--r-- root/root       374 2018-12-24 14:29 ./usr/share/doc/bcalm/test/minitip.fa
drwxr-xr-x root/root         0 2018-12-24 14:29 ./usr/share/doc/bcalm/test/pufferize/
-rw-r--r-- root/root       197 2018-12-24 14:29 ./usr/share/doc/bcalm/test/pufferize/refs.fa
-rw-r--r-- root/root       138 2018-12-24 14:29 ./usr/share/doc/bcalm/test/pufferize/run.sh
-rw-r--r-- root/root      1701 2019-09-27 06:49 ./usr/share/doc/bcalm/test/reference.fasta.gz
-rw-r--r-- root/root        60 2019-09-27 06:49 ./usr/share/doc/bcalm/test/run-tiny.sh
-rw-r--r-- root/root       613 2019-09-27 06:49 ./usr/share/doc/bcalm/test/simple_test.sh
-rw-r--r-- root/root        31 2018-12-24 14:29 ./usr/share/doc/bcalm/test/tiny_read.fa
drwxr-xr-x root/root         0 2018-12-24 14:29 ./usr/share/doc/bcalm/test/uf/
-rw-r--r-- root/root        92 2018-12-24 14:29 ./usr/share/doc/bcalm/test/uf/Makefile
-rw-r--r-- root/root      1802 2018-12-24 14:29 ./usr/share/doc/bcalm/test/uf/testUF.cpp
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/share/man/
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/share/man/man1/
-rw-r--r-- root/root      1264 2019-09-27 06:49 ./usr/share/man/man1/bcalm.1.gz
control file for bcalm-dbgsym_2.2.1-1_amd64.deb (click to toggle)
Package:bcalm-dbgsym
Source:bcalm
Version:2.2.1-1
Architecture:amd64
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:380
Depends:bcalm (=2.2.1-1)
Section:debug
Priority:optional
Description:
debug symbols for bcalm
Auto-Built-Package:debug-symbols
Build-Ids:2f3734f7a711fb727b6aa7dcfec156bf0e3e7c36
lintian 2.24.0~bpo9+2 check for bcalm-dbgsym_2.2.1-1_amd64.deb (click to toggle)
contents of bcalm-dbgsym_2.2.1-1_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2019-09-27 06:49 ./
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/lib/
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/lib/debug/
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/lib/debug/.build-id/2f/
-rw-r--r-- root/root    378320 2019-09-27 06:49 ./usr/lib/debug/.build-id/2f/3734f7a711fb727b6aa7dcfec156bf0e3e7c36.debug
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/share/
drwxr-xr-x root/root         0 2019-09-27 06:49 ./usr/share/doc/
lrwxrwxrwx root/root         0 2019-09-27 06:49 ./usr/share/doc/bcalm-dbgsym -> bcalm

Timestamp: 03.10.2019 / 06:01:30 (UTC)