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bandage_0.8.1-2_amd64.changes (click to toggle)
Format:1.8
Date:Fri, 29 May 2020 20:57:37 +0530
Source:bandage
Binary:bandage bandage-dbgsym bandage-examples
Architecture:source amd64 all
Version:0.8.1-2
Distribution:unstable
Urgency:medium
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By:Pranav Ballaney <ballaneypranav@gmail.com>
Description:
bandage    - Bioinformatics Application for Navigating De novo Assembly Graphs
bandage-examples - Bioinformatics Application for Navigating De novo Assembly Graphs
Changes:
bandage (0.8.1-2) unstable; urgency=medium

  * Team upload

  [ Valentin Marcon ]
  * Correct DOI

  [ Steffen Möller ]
  * Added ref to conda

  [ Pranav Ballaney ]
  * Add autopkgtests
  * Install docs

  [ Andreas Tille ]
  * Standards-Version: 4.5.0 (routine-update)
  * debhelper-compat 13 (routine-update)
  * Remove trailing whitespace in debian/control (routine-update)
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * Set upstream metadata fields: Bug-Database, Bug-Submit.
  * Remove obsolete field Name from debian/upstream/metadata (already present in
    machine-readable debian/copyright).
  * Fix permissions of examples
Files:
01e1dfa3ff681bb40379631bb7482201 2088 science optional bandage_0.8.1-2.dsc
382b46f3497a8415f94ed1c4acd405cd 7276 science optional bandage_0.8.1-2.debian.tar.xz
edc9c7be40909180d6a3254c6eaf1abd 8768764 debug optional bandage-dbgsym_0.8.1-2_amd64.deb
447ee2d302c4c3652650ce6fe2693067 3124032 science optional bandage-examples_0.8.1-2_all.deb
85adce413bb64327d3a76388856c74aa 9724 science optional bandage_0.8.1-2_amd64.buildinfo
5fb41c0b714693e8a5b62818fd7b0983 965820 science optional bandage_0.8.1-2_amd64.deb
control file for bandage-dbgsym_0.8.1-2_amd64.deb (click to toggle)
Package:bandage-dbgsym
Source:bandage
Version:0.8.1-2
Auto-Built-Package:debug-symbols
Architecture:amd64
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:8948
Depends:bandage (=0.8.1-2)
Section:debug
Priority:optional
Description:
debug symbols for bandage
Build-Ids:ea8727a186d491e5a710d5d73e0eeab44f6f2dad
lintian 2.79.0~bpo10+1 check for bandage-dbgsym_0.8.1-2_amd64.deb (click to toggle)
contents of bandage-dbgsym_0.8.1-2_amd64.deb (click to toggle)
drwxr-xr-x root/root         0 2020-05-29 15:27 ./
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/lib/
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/lib/debug/.build-id/ea/
-rw-r--r-- root/root   9152208 2020-05-29 15:27 ./usr/lib/debug/.build-id/ea/8727a186d491e5a710d5d73e0eeab44f6f2dad.debug
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/share/
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-05-29 15:27 ./usr/share/doc/bandage-dbgsym -> bandage
control file for bandage-examples_0.8.1-2_all.deb (click to toggle)
Package:bandage-examples
Source:bandage
Version:0.8.1-2
Architecture:all
Maintainer:Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size:3068
Enhances:bandage
Section:science
Priority:optional
Homepage:https://rrwick.github.io/Bandage
Description:
Bioinformatics Application for Navigating De novo Assembly Graphs Easily (data)
 Bandage is a GUI program that allows users to interact with the assembly
 graphs made by de novo assemblers such as Velvet, SPAdes, MEGAHIT and
 others.
 .
 De novo assembly graphs contain not only assembled contigs but
 also the connections between those contigs, which were previously not
 easily accessible. Bandage visualises assembly graphs, with connections,
 using graph layout algorithms. Nodes in the drawn graph, which represent
 contigs, can be automatically labelled with their ID, length or depth.
 Users can interact with the graph by moving, labelling and colouring
 nodes. Sequence information can also be extracted directly from the
 graph viewer. By displaying connections between contigs, Bandage opens
 up new possibilities for analysing and improving de novo assemblies that
 are not possible by looking at contigs alone.
 .
 More information and download links are on the Bandage website:
 rrwick.github.io/Bandage
 .
 The package contains some example data.
lintian 2.79.0~bpo10+1 check for bandage-examples_0.8.1-2_all.deb (click to toggle)
contents of bandage-examples_0.8.1-2_all.deb (click to toggle)
drwxr-xr-x root/root         0 2020-05-29 15:27 ./
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/share/
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/share/doc/bandage/
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/share/doc/bandage/examples/
-rw-r--r-- root/root      1911 2016-12-15 12:15 ./usr/share/doc/bandage/examples/bandage_command_line_tests.sh.gz
-rw-r--r-- root/root     11176 2016-12-15 12:15 ./usr/share/doc/bandage/examples/bandagetests.cpp.gz
-rw-r--r-- root/root   2894775 2016-12-15 12:15 ./usr/share/doc/bandage/examples/big_test.LastGraph.gz
-rw-r--r-- root/root     18574 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test.LastGraph.gz
-rw-r--r-- root/root       249 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test.Trinity.csv
-rw-r--r-- root/root     35949 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test.Trinity.fasta.gz
-rw-r--r-- root/root       422 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test.csv
-rw-r--r-- root/root    132518 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test.fastg.gz
-rw-r--r-- root/root      4484 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test_plasmids.gfa.gz
-rw-r--r-- root/root      4323 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test_plasmids_separate_sequences.fasta.gz
-rw-r--r-- root/root       463 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test_plasmids_separate_sequences.gfa
-rw-r--r-- root/root       497 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test_queries1.fasta
-rw-r--r-- root/root      8786 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test_queries2.fasta.gz
-rw-r--r-- root/root      2162 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test_query_paths.fasta.gz
-rw-r--r-- root/root      5304 2016-12-15 12:15 ./usr/share/doc/bandage/examples/test_query_paths.gfa.gz
drwxr-xr-x root/root         0 2020-05-29 15:27 ./usr/share/doc/bandage-examples/
-rw-r--r-- root/root       530 2020-05-29 15:27 ./usr/share/doc/bandage-examples/changelog.Debian.gz
-rw-r--r-- root/root      2009 2020-05-29 15:27 ./usr/share/doc/bandage-examples/copyright

Timestamp: 05.06.2020 / 23:01:05 (UTC)